myRT

myRT report for GCA_002876665.1_ASM287666v1

Download annotations/find similar RTs

Seq: MDAM01000083.1 Vibrio sp. 10N.222.55.F9 10N.222.55.F9_contig_19, whole genome shotgun sequence (1782 bp)
Overview 1 RT 1: 200-1630 bp Neighborhood of RT #1 [200, 1779] RVT-GII GIIM Feature: gene Location: 200-331 bp Feature: gene Location: 541-1779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1 372 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1 426-1 630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MDAM01000116.1 Vibrio sp. 10N.222.55.F9 10N.222.55.F9_contig_49, whole genome shotgun sequence (45817 bp)
Overview 1 RT 1: 552-7065 bp Neighborhood of RT #1 [552, 7065] DDE_3 RVT-UG4 Feature: gene Location: 552-908 bp Feature: domain Description: DDE_3 Location: 570-810 bp Feature: domain Description: DDE_3 Location: 570-810 bp Feature: gene Location: 1415-1915 bp Feature: gene Location: 2190-3167 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2550-3003 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 550-3003 bp Feature: gene Location: 3303-6158 bp Feature: gene Location: 6607-7065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-UG4

Seq: MDAM01000140.1 Vibrio sp. 10N.222.55.F9 10N.222.55.F9_contig_70, whole genome shotgun sequence (1202 bp)
Overview 1 RT 1: 1-178 bp Neighborhood of RT #1 [1, 177] RVT-GII Feature: gene Location: 1-177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAM01000152.1 Vibrio sp. 10N.222.55.F9 10N.222.55.F9_contig_81, whole genome shotgun sequence (2310 bp)
Overview 1 RT 1: 112-1962 bp Neighborhood of RT #1 [112, 1962] RVT_N RVT-GII GIIM Feature: gene Location: 112-1743 bp Feature: domain Description: RVT_N Location: 319-562 bp Feature: domain Description: RVT_N Location: 319-562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-1234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607-1234 bp Feature: domain Description: GIIM Note: maturase Location: 1294-1519 bp Feature: domain Description: GIIM Note: maturase Location: 1294 -1519 bp Feature: gene Location: 1819-1962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)