myRT

myRT report for GCA_002876675.1_ASM287667v1

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Seq: MDAQ01000062.1 Vibrio sp. 10N.222.54.F10 10N.222.54.F10_contig_19, whole genome shotgun sequence (1782 bp)
Overview 1 RT 1: 1-1583 bp Neighborhood of RT #1 [1, 1583] RVT-GII GIIM Feature: gene Location: 1-1242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-832 bp Feature: domain Description: GIIM Note: maturase Location: 886-1090 bp Feature: domain Description: GIIM Note: maturase Location: 886-1 090 bp Feature: gene Location: 1452-1583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MDAQ01000063.1 Vibrio sp. 10N.222.54.F10 10N.222.54.F10_contig_2, whole genome shotgun sequence (234624 bp)
Overview 1 RT 1: 2-3446 bp Neighborhood of RT #1 [2, 3493] RVT_N RVT-GII GIIM RND_mfp Feature: gene Location: 2-148 bp Feature: gene Location: 240-383 bp Feature: gene Location: 618-2090 bp Feature: domain Description: RVT_N Location: 666-909 bp Feature: domain Description: RVT_N Location: 666-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1581 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1866 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1866 bp Feature: gene Location: 2138-2347 bp Feature: gene Location: 2369-3493 bp Feature: domain Description: RND_mfp Location: 2537-3446 bp Feature: domain Description: RND_mfp Location: 2 537-3446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RND_mfp (TIGR01730)

Seq: MDAQ01000092.1 Vibrio sp. 10N.222.54.F10 10N.222.54.F10_contig_46, whole genome shotgun sequence (85749 bp)
Overview 1 RT 1: 60822-67907 bp Neighborhood of RT #1 [60822, 67907] RVT-GII Feature: gene Location: 60822-61085 bp Feature: gene Location: 61092-61268 bp Feature: gene Location: 61399-61599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61441-61591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61441-61591 bp Feature: gene Location: 61577-63748 bp Feature: gene Location: 63750-67907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MDAQ01000143.1 Vibrio sp. 10N.222.54.F10 10N.222.54.F10_contig_92, whole genome shotgun sequence (43452 bp)
Overview 1 RT 1: 15-6162 bp Neighborhood of RT #1 [15, 6162] rve_3 RVT-UG4 Feature: gene Location: 15-194 bp Feature: domain Description: rve_3 Location: 54-138 bp Feature: domain Description: rve_3 Location: 54 -138 bp Feature: gene Location: 512-1012 bp Feature: gene Location: 1287-2264 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1647-2100 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 164 7-2100 bp Feature: gene Location: 2400-5255 bp Feature: gene Location: 5704-6162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-UG4