myRT

myRT report for GCA_002876745.1_ASM287674v1

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Seq: MCZS01000036.1 Vibrio splendidus strain 10N.261.46.B10 10N.261.46.B10_contig_13, whole genome shotgun sequence (147219 bp)
Overview 1 RT 1: 44501-55456 bp Neighborhood of RT #1 [44501, 55482] PRK05427 RVT_N RVT-GII GIIM NERD PRK05590 RVT_N RVT-GII GIIM LysR YvrE Feature: gene Location: 44501-45514 bp Feature: domain Description: PRK05427 Location: 44600-45506 bp Feature: domain Description: PRK05427 Location: 44600-45506 bp Feature: gene Location: 45868-46320 bp Feature: gene Location: 46623-48254 bp Feature: RT Description: RVT_N Location: 46830-47073 bp Feature: RT Description: RVT_N Location: 46830-47073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47118-47745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 1 8-47745 bp Feature: domain Description: GIIM Note: maturase Location: 47805-48030 bp Feature: domain Description: GIIM Note: maturase Location: 47805-48030 bp Feature: gene Location: 48330-48473 bp Feature: gene Location: 48807-51014 bp Feature: domain Description: NERD Location: 49737-50052 bp Feature: domain Description: NERD Location: 49737-50052 bp Feature: domain Description: PRK05590 Location: 50898-51009 bp Feature: domain Description: PRK05590 Location: 50898-51 009 bp Feature: gene Location: 51700-53178 bp Feature: RT Description: RVT_N Location: 51754-51997 bp Feature: RT Description: RVT_N Location: 51 754-51 997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52042-52669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52042-52669 bp Feature: domain Description: GIIM Note: maturase Location: 52729-52954 bp Feature: domain Description: GIIM Note: maturase Location: 52729-52954 bp Feature: gene Location: 53602-54510 bp Feature: domain Description: LysR Location: 53617-54484 bp Feature: domain Description: LysR Location: 5361 7-54484 bp Feature: gene Location: 54598-55482 bp Feature: domain Description: YvrE Location: 54676-55456 bp Feature: domain Description: YvrE Location: 54676-55456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05427 (putative manganese-dependent inorganic pyrophosphatase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NERD (pfam08378), PRK05590 (hypothetical protein; Provisional), LysR (COG0583), YvrE (COG3386)

Seq: MCZS01000093.1 Vibrio splendidus strain 10N.261.46.B10 10N.261.46.B10_contig_181, whole genome shotgun sequence (8362 bp)
Overview 1 RT 1: 3618-7696 bp Neighborhood of RT #1 [3618, 7696] AraC SbmC RVT-GII GIIM Feature: gene Location: 3618-4481 bp Feature: domain Description: AraC Location: 3642-3951 bp Feature: domain Description: AraC Location: 3642 -3951 bp Feature: domain Description: SbmC Location: 4017-4479 bp Feature: domain Description: SbmC Location: 4017-4479 bp Feature: gene Location: 5075-5896 bp Feature: gene Location: 5983-7329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6265-6883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 65-6883 bp Feature: domain Description: GIIM Note: maturase Location: 6931-7135 bp Feature: domain Description: GIIM Note: maturase Location: 6931-7135 bp Feature: gene Location: 7348-7512 bp Feature: gene Location: 7535-7696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), SbmC (COG3449), RVT-GII, GIIM (pfam08388)

Seq: MCZS01000123.1 Vibrio splendidus strain 10N.261.46.B10 10N.261.46.B10_contig_208, whole genome shotgun sequence (1958 bp)
Overview 1 RT 1: 89-1679 bp Neighborhood of RT #1 [89, 1870] RVT-GII GIIM Feature: gene Location: 89-238 bp Feature: gene Location: 524-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1679 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)