myRT

myRT report for GCA_002876785.1_ASM287678v1

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Seq: MCZX01000026.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_120, whole genome shotgun sequence (2162 bp)
Overview 1 RT 1: 113-1520 bp Neighborhood of RT #1 [113, 1744] RVT_N RVT-GII GIIM Feature: gene Location: 113-1744 bp Feature: RT Description: RVT_N Location: 320-563 bp Feature: RT Description: RVT_N Location: 320-563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 608-1 235 bp Feature: domain Description: GIIM Note: maturase Location: 1295-1520 bp Feature: domain Description: GIIM Note: maturase Location: 1 295-1 520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCZX01000034.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_128, whole genome shotgun sequence (2056 bp)
Overview 1 RT 1: 1719-2055 bp Neighborhood of RT #1 [1719, 2054] RVT-GII Feature: gene Location: 1719-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734-2055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734-2 055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCZX01000100.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_188, whole genome shotgun sequence (3028 bp)
Overview 1 RT 1: 282-2508 bp Neighborhood of RT #1 [282, 2573] RVT-GII GIIM Acetyltransf_1 Feature: gene Location: 282-443 bp Feature: gene Location: 466-630 bp Feature: gene Location: 649-1995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 1-1549 bp Feature: domain Description: GIIM Note: maturase Location: 1597-1801 bp Feature: domain Description: GIIM Note: maturase Location: 1597-1801 bp Feature: gene Location: 2082-2573 bp Feature: domain Description: Acetyltransf_1 Location: 2250-2508 bp Feature: domain Description: Acetyltransf_1 Location: 2250-2508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, GIIM (pfam08388)

Seq: MCZX01000214.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_30, whole genome shotgun sequence (99296 bp)
Overview 1 RT 1: 71374-76859 bp Neighborhood of RT #1 [71374, 76859] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 71374-72021 bp Feature: domain Description: TIGR02646 Location: 71443-71845 bp Feature: domain Description: TIGR0264 6 Location: 714 4 3-7184 5 bp Feature: gene Location: 72027-73655 bp Feature: domain Description: COG3950 Location: 72210-73461 bp Feature: domain Description: COG3950 Location: 72210-734 61 bp Feature: gene Location: 73645-74604 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73753-74356 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73753-74 356 bp Feature: gene Location: 75110-75310 bp Feature: gene Location: 75933-76859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: MCZX01000233.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_48, whole genome shotgun sequence (5686 bp)
Overview 1 RT 1: 67-3784 bp Neighborhood of RT #1 [67, 3784] RVT-GII GIIM MFS_SLC46_TetA_like Feature: gene Location: 67-216 bp Feature: gene Location: 502-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-1402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1447-1657 bp Feature: domain Description: GIIM Note: maturase Location: 1447-165 7 bp Feature: gene Location: 1935-3158 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 2091-3099 bp Feature: domain Description: MFS_SLC46_TetA_like Location: 2091-3099 bp Feature: gene Location: 3581-3784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SLC46_TetA_like (cd17330), RVT-GII, GIIM (pfam08388)

Seq: MCZX01000283.1 Vibrio splendidus strain 10N.261.45.E8 10N.261.45.E8_contig_93, whole genome shotgun sequence (15731 bp)
Overview 1 RT 1: 7785-15033 bp Neighborhood of RT #1 [7785, 15047] DUF4041 T5orf172 RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM TnsE_C Feature: gene Location: 7785-9227 bp Feature: domain Description: DUF4041 Location: 8388-8553 bp Feature: domain Description: DUF4041 Location: 8388-8553 bp Feature: domain Description: T5orf172 Location: 8901-9141 bp Feature: domain Description: T5orf172 Location: 8901-9141 bp Feature: gene Location: 9231-9545 bp Feature: gene Location: 9938-11452 bp Feature: RT Description: RVT_N Location: 10028-10271 bp Feature: RT Description: RVT_N Location: 10028-10271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10316-10943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10316 -10943 bp Feature: domain Description: GIIM Note: maturase Location: 11000-11228 bp Feature: domain Description: GIIM Note: maturase Location: 11000-11228 bp Feature: gene Location: 11672-11857 bp Feature: gene Location: 11876-13507 bp Feature: RT Description: RVT_N Location: 12083-12326 bp Feature: RT Description: RVT_N Location: 12083-12326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12371-12998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12371-12998 bp Feature: domain Description: GIIM Note: maturase Location: 13055-13283 bp Feature: domain Description: GIIM Note: maturase Location: 13055-13283 bp Feature: gene Location: 13860-14072 bp Feature: gene Location: 14370-15047 bp Feature: domain Description: TnsE_C Location: 14595-15033 bp Feature: domain Description: TnsE_C Location: 14595-15033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4041 (pfam13250), T5orf172 (smart00974), TnsE_C (pfam18623)