myRT

myRT report for GCA_002876865.1_ASM287686v1

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Seq: MCYW01000085.1 Vibrio kanaloae strain 10N.261.49.B3 10N.261.49.B3_contig_49, whole genome shotgun sequence (44561 bp)
Overview 1 RT 1: 7452-16461 bp Neighborhood of RT #1 [7452, 16463] MhpC RVT-UG10 pheT Feature: gene Location: 7452-8324 bp Feature: domain Description: MhpC Location: 7557-8307 bp Feature: domain Description: MhpC Location: 7557-8307 bp Feature: gene Location: 8531-10477 bp Feature: gene Location: 10511-12208 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 10559-10811 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 0559-1 081 1 bp Feature: gene Location: 12109-13899 bp Feature: gene Location: 14076-16463 bp Feature: domain Description: pheT Location: 14079-16461 bp Feature: domain Description: pheT Location: 1 4079-1 6461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-UG10, pheT (PRK09616)

Seq: MCYW01000115.1 Vibrio kanaloae strain 10N.261.49.B3 10N.261.49.B3_contig_76, whole genome shotgun sequence (29731 bp)
Overview 1 RT 1: 24600-29406 bp Neighborhood of RT #1 [24600, 29406] PRK07726 zf-C4_Topoisom HU RVT-GII GIIM RVT_N Feature: gene Location: 24600-26816 bp Feature: domain Description: PRK07726 Location: 24603-26595 bp Feature: domain Description: PRK0772 6 Location: 2 4603-2 6595 bp Feature: domain Description: zf-C4_Topoisom Location: 26670-26757 bp Feature: domain Description: zf-C4_Topoisom Location: 2 6670-2 6757 bp Feature: gene Location: 26834-27337 bp Feature: domain Description: HU Location: 27068-27320 bp Feature: domain Description: HU Location: 2 7068-2 732 0 bp Feature: gene Location: 27557-28759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27623-28250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 762 3-2 82 50 bp Feature: domain Description: GIIM Note: maturase Location: 28310-28535 bp Feature: domain Description: GIIM Note: maturase Location: 2 8310-2 8535 bp Feature: gene Location: 28867-29187 bp Feature: domain Description: RVT_N Location: 29074-29158 bp Feature: domain Description: RVT_N Location: 2 9074-2 9158 bp Feature: gene Location: 29263-29406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), zf-C4_Topoisom (pfam01396), HU (cd13831), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)