myRT

myRT report for GCA_002876915.1_ASM287691v1

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Seq: MCYT01000012.1 Vibrio sp. 10N.261.49.E11 10N.261.49.E11_contig_108, whole genome shotgun sequence (74746 bp)
Overview 1 RT 1: 43299-47053 bp Neighborhood of RT #1 [43299, 47053] RVT-GII GIIM SUFU Feature: gene Location: 43299-43814 bp Feature: gene Location: 44005-44154 bp Feature: gene Location: 44440-45786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44722-45340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44722-45340 bp Feature: domain Description: GIIM Note: maturase Location: 45385-45595 bp Feature: domain Description: GIIM Note: maturase Location: 45385-45595 bp Feature: gene Location: 45882-46439 bp Feature: domain Description: SUFU Location: 45990-46428 bp Feature: domain Description: SUFU Location: 45990-46428 bp Feature: gene Location: 46850-47053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SUFU (pfam05076)

Seq: MCYT01000014.1 Vibrio sp. 10N.261.49.E11 10N.261.49.E11_contig_11, whole genome shotgun sequence (49488 bp)
Overview 1 RT 1: 16965-21456 bp Neighborhood of RT #1 [16965, 21456] INT_RitA_C_like RVT_N RVT-GII GIIM Feature: gene Location: 16965-17594 bp Feature: domain Description: INT_RitA_C_like Location: 17085-17577 bp Feature: domain Description: INT_RitA_C_like Location: 17085-17577 bp Feature: gene Location: 17537-17752 bp Feature: gene Location: 18085-19716 bp Feature: RT Description: RVT_N Location: 18292-18535 bp Feature: RT Description: RVT_N Location: 182 92 -18535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18580-19207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18580-192 07 bp Feature: domain Description: GIIM Note: maturase Location: 19267-19492 bp Feature: domain Description: GIIM Note: maturase Location: 192 67-19492 bp Feature: gene Location: 20097-20576 bp Feature: gene Location: 20869-21456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitA_C_like (cd01188), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCYT01000164.1 Vibrio sp. 10N.261.49.E11 10N.261.49.E11_contig_25, whole genome shotgun sequence (101425 bp)
Overview 1 RT 1: 9062-13712 bp Neighborhood of RT #1 [9062, 13930] PRK05855 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 9062-9403 bp Feature: domain Description: PRK05855 Location: 9164-9395 bp Feature: domain Description: PRK05855 Location: 9164-93 95 bp Feature: gene Location: 9575-9718 bp Feature: gene Location: 10508-11524 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10682-11273 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10682-11273 bp Feature: gene Location: 11514-13139 bp Feature: domain Description: COG3950 Location: 11718-13098 bp Feature: domain Description: COG3 950 Location: 11718-13 098 bp Feature: gene Location: 13145-13930 bp Feature: domain Description: TIGR02646 Location: 13262-13712 bp Feature: domain Description: TIGR02646 Location: 13 262-13 712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), PRK05855 (SDR family oxidoreductase)