myRT

myRT report for GCA_002877065.1_ASM287706v1

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Seq: MCYN01000013.1 Vibrio lentus strain 10N.261.51.A9 10N.261.51.A9_contig_2, whole genome shotgun sequence (397786 bp)
Overview 1 RT 1: 179400-190022 bp Neighborhood of RT #1 [179400, 190022] pheS pheT AE_Prim_S_like RVT-UG10 Feature: gene Location: 179400-180449 bp Feature: domain Description: pheS Location: 179466-180444 bp Feature: domain Description: pheS Location: 1 79466-1 80444 bp Feature: gene Location: 180468-182855 bp Feature: domain Description: pheT Location: 180471-182853 bp Feature: domain Description: pheT Location: 1 80471 -1 82853 bp Feature: gene Location: 183005-188332 bp Feature: domain Description: AE_Prim_S_like Location: 183080-183395 bp Feature: domain Description: AE_Prim_S_like Location: 1 83080-1 83395 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 184337-184997 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 84337-1 84997 bp Feature: gene Location: 188453-188815 bp Feature: gene Location: 189075-190022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pheS (TIGR00468), pheT (PRK09616), AE_Prim_S_like (cl01287), RVT-UG10

Seq: MCYN01000016.1 Vibrio lentus strain 10N.261.51.A9 10N.261.51.A9_contig_22, whole genome shotgun sequence (55962 bp)
Overview 1 RT 1: 23290-28750 bp Neighborhood of RT #1 [23290, 28761] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 23290-23583 bp Feature: domain Description: trans_reg_C Location: 23353-23572 bp Feature: domain Description: trans_reg_C Location: 2 3353-2 3572 bp Feature: gene Location: 23615-23989 bp Feature: domain Description: Avd_like Location: 23645-23975 bp Feature: domain Description: Avd_like Location: 2 3645-2 3975 bp Feature: gene Location: 23969-25225 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24176-24878 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4176-2 4878 bp Feature: gene Location: 25587-26078 bp Feature: gene Location: 26167-28761 bp Feature: domain Description: Big_1 Location: 27748-27877 bp Feature: domain Description: Big_1 Location: 2 7748-2 7877 bp Feature: domain Description: Big_1 Location: 27985-28168 bp Feature: domain Description: Big_1 Location: 2 7985-2 8168 bp Feature: domain Description: DUF1566 Location: 28495-28750 bp Feature: domain Description: DUF1566 Location: 2 8495-2 8750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), Avd_like (cd16376), RVT-DGRs, Big_1 (pfam02369), DUF1566 (pfam07603)

Seq: MCYN01000030.1 Vibrio lentus strain 10N.261.51.A9 10N.261.51.A9_contig_35, whole genome shotgun sequence (97827 bp)
Overview 1 RT 1: 83963-87653 bp Neighborhood of RT #1 [83963, 87661] Metallophos_2 RVT-GII GIIM DHPS-like_MBL-fold Feature: gene Location: 83963-84724 bp Feature: domain Description: Metallophos_2 Location: 83984-84536 bp Feature: domain Description: Metallophos_2 Location: 83 984-8453 6 bp Feature: gene Location: 84729-84911 bp Feature: gene Location: 85368-86327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85650-86268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85650-86268 bp Feature: gene Location: 86360-86713 bp Feature: domain Description: GIIM Note: maturase Location: 86381-86519 bp Feature: domain Description: GIIM Note: maturase Location: 863 81-86519 bp Feature: gene Location: 86816-87661 bp Feature: domain Description: DHPS-like_MBL-fold Location: 86825-87653 bp Feature: domain Description: DHPS-like_MBL-fold Location: 86825-87653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Metallophos_2 (pfam12850), RVT-GII, GIIM (pfam08388), DHPS-like_MBL-fold (cd07713)