myRT

myRT report for GCA_002877115.1_ASM287711v1

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Seq: MCYF01000032.1 Vibrio lentus strain 10N.261.51.F9 10N.261.51.F9_contig_4, whole genome shotgun sequence (1116235 bp)
Overview 1 RT 1: 877603-883645 bp Neighborhood of RT #1 [877603, 883662] MFS_MefA_like RVT_N RVT-GII GIIM Cas6_I-F Csy3_I-F Feature: gene Location: 877603-878784 bp Feature: domain Description: MFS_MefA_like Location: 877618-878740 bp Feature: domain Description: MFS_MefA_like Location: 87761 8-878740 bp Feature: gene Location: 879312-879443 bp Feature: gene Location: 880056-881528 bp Feature: RT Description: RVT_N Location: 880104-880347 bp Feature: RT Description: RVT_N Location: 8801 04-880347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880392-881019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880392-881 01 9 bp Feature: domain Description: GIIM Note: maturase Location: 881079-881304 bp Feature: domain Description: GIIM Note: maturase Location: 881 079-881 304 bp Feature: gene Location: 882016-882621 bp Feature: domain Description: Cas6_I-F Location: 882028-882613 bp Feature: domain Description: Cas6_I-F Location: 882028-88261 3 bp Feature: gene Location: 882631-883662 bp Feature: domain Description: Csy3_I-F Location: 882640-883645 bp Feature: domain Description: Csy3_I-F Location: 882640-883645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Cas6_I-F (cl09835), Csy3_I-F (cl09832)

Seq: MCYF01000035.1 Vibrio lentus strain 10N.261.51.F9 10N.261.51.F9_contig_7, whole genome shotgun sequence (1024674 bp)
Overview 1 RT 1: 779482-785135 bp Neighborhood of RT #1 [779482, 785245] PRK05096 RVT-Retrons GstA TPR YdcF-like Feature: gene Location: 779482-780525 bp Feature: domain Description: PRK05096 Location: 779485-780520 bp Feature: domain Description: PRK05096 Location: 779485-78052 0 bp Feature: gene Location: 780965-781792 bp Feature: gene Location: 781901-782818 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 782003-782588 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 782 003-782 588 bp Feature: gene Location: 782989-783663 bp Feature: domain Description: GstA Location: 782992-783580 bp Feature: domain Description: GstA Location: 782 992 -783580 bp Feature: gene Location: 784148-785245 bp Feature: domain Description: TPR Location: 784394-784607 bp Feature: domain Description: TPR Location: 784394-784607 bp Feature: domain Description: YdcF-like Location: 784730-785135 bp Feature: domain Description: YdcF-like Location: 784730-785135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05096 (guanosine 5'-monophosphate oxidoreductase; Provisional), RVT-Retrons, GstA (COG0625), TPR (smart00028), YdcF-like (cl00630)

Seq: MCYF01000036.1 Vibrio lentus strain 10N.261.51.F9 10N.261.51.F9_contig_8, whole genome shotgun sequence (156553 bp)
Overview 1 RT 1: 23154-28608 bp Neighborhood of RT #1 [23154, 28619] trans_reg_C Avd_like RVT-DGRs Big_1 Big_1 DUF1566 Feature: gene Location: 23154-23447 bp Feature: domain Description: trans_reg_C Location: 23217-23436 bp Feature: domain Description: trans_reg_C Location: 23 217-23 43 6 bp Feature: gene Location: 23479-23853 bp Feature: domain Description: Avd_like Location: 23509-23839 bp Feature: domain Description: Avd_like Location: 23 509-23 83 9 bp Feature: gene Location: 23833-25089 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24040-24742 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24040-24742 bp Feature: gene Location: 25451-25942 bp Feature: gene Location: 26031-28619 bp Feature: domain Description: Big_1 Location: 27612-27741 bp Feature: domain Description: Big_1 Location: 27612-27741 bp Feature: domain Description: Big_1 Location: 27849-28032 bp Feature: domain Description: Big_1 Location: 27849-2803 2 bp Feature: domain Description: DUF1566 Location: 28359-28608 bp Feature: domain Description: DUF1566 Location: 283 59-28608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trans_reg_C (cd00383), Avd_like (cd16376), RVT-DGRs, Big_1 (pfam02369), DUF1566 (pfam07603)