myRT

myRT report for GCA_002877155.1_ASM287715v1

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Seq: MCXT01000027.1 Vibrio sp. 10N.261.52.E5 10N.261.52.E5_contig_3, whole genome shotgun sequence (220170 bp)
Overview 1 RT 1: 141443-147153 bp Neighborhood of RT #1 [141443, 147185] YvrE LysR RVT_N RVT-GII GIIM AraJ Feature: gene Location: 141443-142327 bp Feature: domain Description: YvrE Location: 141521-142301 bp Feature: domain Description: YvrE Location: 1 41 521 -1 42301 bp Feature: gene Location: 142415-143323 bp Feature: domain Description: LysR Location: 142430-143300 bp Feature: domain Description: LysR Location: 1 42430-1 43300 bp Feature: gene Location: 143782-145413 bp Feature: RT Description: RVT_N Location: 143989-144232 bp Feature: RT Description: RVT_N Location: 1 43989-1 44232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144277-144904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 44277-1 44904 bp Feature: domain Description: GIIM Note: maturase Location: 144964-145189 bp Feature: domain Description: GIIM Note: maturase Location: 1 44964-1 451 89 bp Feature: gene Location: 145433-145642 bp Feature: gene Location: 146016-147185 bp Feature: domain Description: AraJ Location: 146022-147153 bp Feature: domain Description: AraJ Location: 1 46022-1 471 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YvrE (COG3386), LysR (COG0583), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AraJ (COG2814)

Seq: MCXT01000035.1 Vibrio sp. 10N.261.52.E5 10N.261.52.E5_contig_37, whole genome shotgun sequence (14156 bp)
Overview 1 RT 1: 235-4618 bp Neighborhood of RT #1 [235, 4618] COG3547 RVT_N RVT-GII GIIM DUF3577 Feature: gene Location: 235-1272 bp Feature: domain Description: COG3547 Location: 247-1219 bp Feature: domain Description: COG3547 Location: 2 47-12 19 bp Feature: gene Location: 1563-3035 bp Feature: RT Description: RVT_N Location: 1611-1854 bp Feature: RT Description: RVT_N Location: 1611-1854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1899-2526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1899-2 52 6 bp Feature: domain Description: GIIM Note: maturase Location: 2586-2811 bp Feature: domain Description: GIIM Note: maturase Location: 2 586-2 811 bp Feature: gene Location: 3527-3970 bp Feature: domain Description: DUF3577 Location: 3542-3929 bp Feature: domain Description: DUF3577 Location: 3542 -392 9 bp Feature: gene Location: 4094-4618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: MCXT01000055.1 Vibrio sp. 10N.261.52.E5 10N.261.52.E5_contig_55, whole genome shotgun sequence (9837 bp)
Overview 1 RT 1: 6771-9404 bp Neighborhood of RT #1 [6771, 9628] RVT_N RVT-GII GIIM Feature: gene Location: 6771-7661 bp Feature: gene Location: 7728-7934 bp Feature: gene Location: 8114-9628 bp Feature: RT Description: RVT_N Location: 8204-8447 bp Feature: RT Description: RVT_N Location: 8204-8447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8492-9119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8492-9119 bp Feature: domain Description: GIIM Note: maturase Location: 9176-9404 bp Feature: domain Description: GIIM Note: maturase Location: 9176-9404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)