myRT

myRT report for GCA_002877245.1_ASM287724v1

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Seq: MCXG01000013.1 Vibrio sp. 10N.261.54.C3 10N.261.54.C3_contig_109, whole genome shotgun sequence (5829 bp)
Overview 1 RT 1: 3-3103 bp Neighborhood of RT #1 [3, 3249] RVT_N RVT-GII SSL2 Feature: gene Location: 3-1130 bp Feature: domain Description: RVT_N Location: 210-453 bp Feature: domain Description: RVT_N Location: 21 0-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1 047 bp Feature: gene Location: 1206-1349 bp Feature: gene Location: 1870-3249 bp Feature: domain Description: SSL2 Location: 1876-3103 bp Feature: domain Description: SSL2 Location: 1 876-31 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, SSL2 (COG1061)

Seq: MCXG01000056.1 Vibrio sp. 10N.261.54.C3 10N.261.54.C3_contig_148, whole genome shotgun sequence (1659 bp)
Overview 1 RT 1: 1-1580 bp Neighborhood of RT #1 [1, 1657] RVT_N RVT-GII Feature: gene Location: 1-147 bp Feature: gene Location: 239-382 bp Feature: gene Location: 617-1657 bp Feature: domain Description: RVT_N Location: 665-908 bp Feature: domain Description: RVT_N Location: 665-908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: MCXG01000115.1 Vibrio sp. 10N.261.54.C3 10N.261.54.C3_contig_44, whole genome shotgun sequence (40791 bp)
Overview 1 RT 1: 34734-40717 bp Neighborhood of RT #1 [34734, 40773] RVT-UG4 rve_3 Feature: gene Location: 34734-35084 bp Feature: gene Location: 35533-38388 bp Feature: gene Location: 38524-39501 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38884-39337 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 8884-3 93 3 7 bp Feature: gene Location: 39776-40276 bp Feature: gene Location: 40594-40773 bp Feature: domain Description: rve_3 Location: 40633-40717 bp Feature: domain Description: rve_3 Location: 4063 3 -40717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, rve_3 (pfam13683)

Seq: MCXG01000121.1 Vibrio sp. 10N.261.54.C3 10N.261.54.C3_contig_5, whole genome shotgun sequence (2573 bp)
Overview 1 RT 1: 202-2313 bp Neighborhood of RT #1 [202, 2537] RVT-GII RVT-GII GIIM Feature: gene Location: 202-333 bp Feature: gene Location: 506-766 bp Feature: gene Location: 612-2537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857-2055 bp Feature: domain Description: GIIM Note: maturase Location: 2109-2313 bp Feature: domain Description: GIIM Note: maturase Location: 2109-2313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MCXG01000146.1 Vibrio sp. 10N.261.54.C3 10N.261.54.C3_contig_72, whole genome shotgun sequence (50064 bp)
Overview 1 RT 1: 34413-38800 bp Neighborhood of RT #1 [34413, 38823] YhhI YhhI YhhI RVT-GII GIIM YhhI ECA_wecA Feature: gene Location: 34413-35195 bp Feature: domain Description: YhhI Location: 34431-34608 bp Feature: domain Description: YhhI Location: 34431-34608 bp Feature: domain Description: YhhI Location: 34674-35013 bp Feature: domain Description: YhhI Location: 34674-35 013 bp Feature: domain Description: YhhI Location: 35064-35169 bp Feature: domain Description: YhhI Location: 35 064-35 169 bp Feature: gene Location: 35385-35654 bp Feature: gene Location: 35786-36979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35933-36590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 933-365 90 bp Feature: domain Description: GIIM Note: maturase Location: 36671-36893 bp Feature: domain Description: GIIM Note: maturase Location: 36671-36893 bp Feature: gene Location: 37062-37274 bp Feature: domain Description: YhhI Location: 37068-37191 bp Feature: domain Description: YhhI Location: 37068-37191 bp Feature: gene Location: 37744-38823 bp Feature: domain Description: ECA_wecA Location: 37768-38800 bp Feature: domain Description: ECA_wecA Location: 37768-38800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), ECA_wecA (TIGR02380)