myRT

myRT report for GCA_002877285.1_ASM287728v1

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Seq: MCXI01000005.1 Vibrio breoganii strain 10N.261.54.B2 10N.261.54.B2_contig_101, whole genome shotgun sequence (328 bp)
Overview 1 RT 1: 2-326 bp Neighborhood of RT #1 [2, 325] RVT-GII Feature: gene Location: 2-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCXI01000006.1 Vibrio breoganii strain 10N.261.54.B2 10N.261.54.B2_contig_102, whole genome shotgun sequence (202 bp)
Overview 1 RT 1: 2-197 bp Neighborhood of RT #1 [2, 199] RVT-CRISPR-like Feature: gene Location: 2-199 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-197 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: MCXI01000008.1 Vibrio breoganii strain 10N.261.54.B2 10N.261.54.B2_contig_104, whole genome shotgun sequence (401 bp)
Overview 1 RT 1: 2-401 bp Neighborhood of RT #1 [2, 400] RVT-GII Feature: gene Location: 2-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122-401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122-401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCXI01000072.1 Vibrio breoganii strain 10N.261.54.B2 10N.261.54.B2_contig_26, whole genome shotgun sequence (34466 bp)
Overview 1 RT 1: 24466-32432 bp Neighborhood of RT #1 [24466, 33253] PRK09692 T5orf172 RVT_N RVT-GII GIIM Trypsin Trypsin Feature: gene Location: 24466-25668 bp Feature: domain Description: PRK09692 Location: 24478-25657 bp Feature: domain Description: PRK09692 Location: 24 4 78-25657 bp Feature: gene Location: 26105-27568 bp Feature: domain Description: T5orf172 Location: 26360-26639 bp Feature: domain Description: T5orf172 Location: 26360-26639 bp Feature: gene Location: 28477-29955 bp Feature: domain Description: RVT_N Location: 28531-28774 bp Feature: domain Description: RVT_N Location: 28531-28774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28819-29446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28819-294 4 6 bp Feature: domain Description: GIIM Note: maturase Location: 29506-29731 bp Feature: domain Description: GIIM Note: maturase Location: 29506-29731 bp Feature: gene Location: 29974-30156 bp Feature: gene Location: 31493-33253 bp Feature: domain Description: Trypsin Location: 31610-31814 bp Feature: domain Description: Trypsin Location: 31610-31814 bp Feature: domain Description: Trypsin Location: 32009-32432 bp Feature: domain Description: Trypsin Location: 32009-324 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), T5orf172 (smart00974), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Trypsin (pfam00089)

Seq: MCXI01000132.1 Vibrio breoganii strain 10N.261.54.B2 10N.261.54.B2_contig_80, whole genome shotgun sequence (8502 bp)
Overview 1 RT 1: 319-2726 bp Neighborhood of RT #1 [319, 2782] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 319-450 bp Feature: gene Location: 660-1973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1494 bp Feature: domain Description: GIIM Note: maturase Location: 1545-1746 bp Feature: domain Description: GIIM Note: maturase Location: 15 45 -1746 bp Feature: gene Location: 2000-2143 bp Feature: gene Location: 2462-2782 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2486-2726 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2486-2726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)