myRT

myRT report for GCA_002877305.1_ASM287730v1

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Seq: MCXF01000043.1 Vibrio breoganii strain 10N.261.54.C7 10N.261.54.C7_contig_136, whole genome shotgun sequence (2091 bp)
Overview 1 RT 1: 2-1843 bp Neighborhood of RT #1 [2, 2073] RVT-GII GIIM Feature: gene Location: 2-148 bp Feature: gene Location: 348-638 bp Feature: gene Location: 739-2073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1 573 bp Feature: domain Description: GIIM Note: maturase Location: 1621-1843 bp Feature: domain Description: GIIM Note: maturase Location: 1 621 -1 843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MCXF01000079.1 Vibrio breoganii strain 10N.261.54.C7 10N.261.54.C7_contig_169, whole genome shotgun sequence (3953 bp)
Overview 1 RT 1: 119-3070 bp Neighborhood of RT #1 [119, 3126] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 119-379 bp Feature: gene Location: 662-793 bp Feature: gene Location: 1003-2316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1222-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 2 -1837 bp Feature: domain Description: GIIM Note: maturase Location: 1888-2089 bp Feature: domain Description: GIIM Note: maturase Location: 1888-2 089 bp Feature: gene Location: 2343-2486 bp Feature: gene Location: 2806-3126 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2830-3070 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2 830-3070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: MCXF01000086.1 Vibrio breoganii strain 10N.261.54.C7 10N.261.54.C7_contig_175, whole genome shotgun sequence (5010 bp)
Overview 1 RT 1: 1108-4864 bp Neighborhood of RT #1 [1108, 4992] RVT_N RVT-GII GIIM AAA_21 RloB Feature: gene Location: 1108-1263 bp Feature: gene Location: 1481-2947 bp Feature: RT Description: RVT_N Location: 1535-1778 bp Feature: RT Description: RVT_N Location: 153 5-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1823-2450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1823 -2450 bp Feature: domain Description: GIIM Note: maturase Location: 2510-2735 bp Feature: domain Description: GIIM Note: maturase Location: 2510-273 5 bp Feature: gene Location: 3287-4471 bp Feature: domain Description: AAA_21 Location: 3428-4322 bp Feature: domain Description: AAA_21 Location: 3 428-43 22 bp Feature: gene Location: 4483-4992 bp Feature: domain Description: RloB Location: 4528-4864 bp Feature: domain Description: RloB Location: 4528-4864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304), RloB (pfam13707)