myRT

myRT report for GCA_002877375.1_ASM287737v1

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Seq: MCXC01000004.1 Vibrio cyclitrophicus strain 10N.261.54.F1 10N.261.54.F1_contig_11, whole genome shotgun sequence (204722 bp)
Overview 1 RT 1: 42006-46193 bp Neighborhood of RT #1 [42006, 46193] YHI9 RVT-UG17 SLATT_5 Feature: gene Location: 42006-42164 bp Feature: gene Location: 42183-43151 bp Feature: domain Description: YHI9 Location: 42219-43044 bp Feature: domain Description: YHI9 Location: 4221 9-43044 bp Feature: gene Location: 43466-44797 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 43694-44297 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 43694-44297 bp Feature: gene Location: 44799-45452 bp Feature: domain Description: SLATT_5 Location: 44808-45399 bp Feature: domain Description: SLATT_5 Location: 44808-45399 bp Feature: gene Location: 45978-46193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YHI9 (COG0384), RVT-UG17, SLATT_5 (pfam18160)

Seq: MCXC01000053.1 Vibrio cyclitrophicus strain 10N.261.54.F1 10N.261.54.F1_contig_56, whole genome shotgun sequence (11497 bp)
Overview 1 RT 1: 3221-6645 bp Neighborhood of RT #1 [3221, 6698] GIIM RVT_N RVT-GII Acetyltransf_1 Feature: gene Location: 3221-3457 bp Feature: gene Location: 3552-4001 bp Feature: domain Description: GIIM Note: maturase Location: 3558-3777 bp Feature: domain Description: GIIM Note: maturase Location: 3558-3777 bp Feature: gene Location: 4090-5184 bp Feature: domain Description: RVT_N Location: 4297-4540 bp Feature: domain Description: RVT_N Location: 42 97-4540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4585-5140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4585-5140 bp Feature: gene Location: 5229-5414 bp Feature: gene Location: 5742-6698 bp Feature: domain Description: Acetyltransf_1 Location: 6423-6645 bp Feature: domain Description: Acetyltransf_1 Location: 642 3-6645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT_N (pfam13655), RVT-GII, Acetyltransf_1 (pfam00583)

Seq: MCXC01000055.1 Vibrio cyclitrophicus strain 10N.261.54.F1 10N.261.54.F1_contig_58, whole genome shotgun sequence (2161 bp)
Overview 1 RT 1: 189-1825 bp Neighborhood of RT #1 [189, 2049] RVT_N RVT-GII GIIM Feature: gene Location: 189-503 bp Feature: gene Location: 547-2049 bp Feature: domain Description: RVT_N Location: 625-868 bp Feature: domain Description: RVT_N Location: 625-868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913 -1540 bp Feature: domain Description: GIIM Note: maturase Location: 1600-1825 bp Feature: domain Description: GIIM Note: maturase Location: 1600-1825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)