myRT

myRT report for GCA_002877405.1_ASM287740v1

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Seq: MCXA01000003.1 Vibrio cyclitrophicus strain 10N.261.55.A11 10N.261.55.A11_contig_10, whole genome shotgun sequence (151791 bp)
Overview 1 RT 1: 49557-54296 bp Neighborhood of RT #1 [49557, 54313] TIGR02646 COG3950 RVT-Retrons sigma70-ECF AlpA Feature: gene Location: 49557-50330 bp Feature: domain Description: TIGR02646 Location: 49629-50160 bp Feature: domain Description: TIGR02646 Location: 49629-501 60 bp Feature: gene Location: 50317-51942 bp Feature: domain Description: COG3950 Location: 50500-51871 bp Feature: domain Description: COG3950 Location: 50500-51 871 bp Feature: gene Location: 51935-52879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52034-52631 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52034-52631 bp Feature: gene Location: 53276-53968 bp Feature: domain Description: sigma70-ECF Location: 53339-53951 bp Feature: domain Description: sigma70-ECF Location: 53339-53951 bp Feature: gene Location: 54089-54313 bp Feature: domain Description: AlpA Location: 54128-54296 bp Feature: domain Description: AlpA Location: 541 28-54296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, sigma70-ECF (TIGR02937), AlpA (COG3311)

Seq: MCXA01000024.1 Vibrio cyclitrophicus strain 10N.261.55.A11 10N.261.55.A11_contig_3, whole genome shotgun sequence (175527 bp)
Overview 1 RT 1: 48897-54086 bp Neighborhood of RT #1 [48897, 54086] MhpC SLATT_5 RVT-UG17 Feature: gene Location: 48897-49769 bp Feature: domain Description: MhpC Location: 49002-49749 bp Feature: domain Description: MhpC Location: 49002 -49749 bp Feature: gene Location: 50296-50919 bp Feature: domain Description: SLATT_5 Location: 50302-50836 bp Feature: domain Description: SLATT_5 Location: 50302 -50836 bp Feature: gene Location: 50919-52262 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 51150-51756 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 51150-51756 bp Feature: gene Location: 52619-53350 bp Feature: gene Location: 53400-54086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), SLATT_5 (pfam18160), RVT-UG17