myRT

myRT report for GCA_002877545.1_ASM287754v1

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Seq: MCWQ01000012.1 Vibrio breoganii strain 10N.261.55.F5 10N.261.55.F5_contig_108, whole genome shotgun sequence (2090 bp)
Overview 1 RT 1: 19-2089 bp Neighborhood of RT #1 [19, 2089] RVT-GII GIIM Feature: gene Location: 19-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232-853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232-853 bp Feature: domain Description: GIIM Note: maturase Location: 901-1123 bp Feature: domain Description: GIIM Note: maturase Location: 901 -1 1 23 bp Feature: gene Location: 1516-1743 bp Feature: gene Location: 1943-2089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MCWQ01000056.1 Vibrio breoganii strain 10N.261.55.F5 10N.261.55.F5_contig_148, whole genome shotgun sequence (441 bp)
Overview 1 RT 1: 3-438 bp Neighborhood of RT #1 [3, 440] RVT-GII Feature: gene Location: 3-440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MCWQ01000112.1 Vibrio breoganii strain 10N.261.55.F5 10N.261.55.F5_contig_56, whole genome shotgun sequence (4589 bp)
Overview 1 RT 1: 828-3834 bp Neighborhood of RT #1 [828, 3834] DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 828-1169 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 852-1092 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 852-1092 bp Feature: gene Location: 1467-1610 bp Feature: gene Location: 1637-2950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1856-2471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1856-2471 bp Feature: domain Description: GIIM Note: maturase Location: 2522-2723 bp Feature: domain Description: GIIM Note: maturase Location: 2522-2723 bp Feature: gene Location: 3160-3291 bp Feature: gene Location: 3574-3834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)

Seq: MCWQ01000121.1 Vibrio breoganii strain 10N.261.55.F5 10N.261.55.F5_contig_64, whole genome shotgun sequence (66139 bp)
Overview 1 RT 1: 23793-33410 bp Neighborhood of RT #1 [23793, 33451] DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 RVT-UNC Csx1_III-U YfaS Feature: gene Location: 23793-25541 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24420-24576 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24 4 20-24 576 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24753-25005 bp Feature: domain Description: DEXXQc_Upf1-like Location: 24 753-25005 bp Feature: domain Description: KOG1803 Location: 25203-25455 bp Feature: domain Description: KOG1803 Location: 25203-254 55 bp Feature: gene Location: 25619-25828 bp Feature: gene Location: 25878-27497 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 26133-26778 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 26133-26778 bp Feature: gene Location: 27494-28627 bp Feature: domain Description: Csx1_III-U Location: 27497-28160 bp Feature: domain Description: Csx1_III-U Location: 274 97-28160 bp Feature: gene Location: 28814-33451 bp Feature: domain Description: YfaS Location: 29138-33410 bp Feature: domain Description: YfaS Location: 29138-334 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC), Csx1_III-U (cl21570), YfaS (COG2373)