myRT

myRT report for GCA_002877645.1_ASM287764v1

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Seq: MCXQ01000002.1 Vibrio lentus strain 10N.261.52.F1 10N.261.52.F1_contig_1, whole genome shotgun sequence (1069519 bp)
Overview 1 RT 1: 583166-589571 bp Neighborhood of RT #1 [583166, 589591] pheT RVT-UG25 MhpC Feature: gene Location: 583166-585553 bp Feature: domain Description: pheT Location: 583169-585551 bp Feature: domain Description: pheT Location: 5831 69-585551 bp Feature: gene Location: 585727-586503 bp Feature: gene Location: 586500-587450 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 586917-587316 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 58691 7-58731 6 bp Feature: gene Location: 587453-588400 bp Feature: gene Location: 588719-589591 bp Feature: domain Description: MhpC Location: 588824-589571 bp Feature: domain Description: MhpC Location: 588824-589571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pheT (PRK09616), RVT-UG25, MhpC (COG0596)

Seq: MCXQ01000034.1 Vibrio lentus strain 10N.261.52.F1 10N.261.52.F1_contig_4, whole genome shotgun sequence (442604 bp)
Overview 1 RT 1: 145701-150101 bp Neighborhood of RT #1 [145701, 150262] CxxCxxCC YcgN RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 145701-146129 bp Feature: domain Description: CxxCxxCC Location: 145887-146061 bp Feature: domain Description: CxxCxxCC Location: 145887-146061 bp Feature: gene Location: 146109-146555 bp Feature: domain Description: YcgN Location: 146115-146532 bp Feature: domain Description: YcgN Location: 146115-146532 bp Feature: gene Location: 147059-147997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147161-147752 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147161-147752 bp Feature: gene Location: 147984-149603 bp Feature: domain Description: COG3950 Location: 148173-149514 bp Feature: domain Description: COG3950 Location: 148173-149514 bp Feature: gene Location: 149603-150262 bp Feature: domain Description: TIGR02646 Location: 149672-150101 bp Feature: domain Description: TIGR02 646 Location: 149672 -150101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxCxxCC (pfam03692), YcgN (COG2983), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: MCXQ01000045.1 Vibrio lentus strain 10N.261.52.F1 10N.261.52.F1_contig_6, whole genome shotgun sequence (121854 bp)
Overview 1 RT 1: 116802-121851 bp Neighborhood of RT #1 [116802, 121851] RVT-UG7 Feature: gene Location: 116802-117260 bp Feature: gene Location: 117616-118287 bp Feature: gene Location: 118421-119965 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 118808-119228 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 118808-119228 bp Feature: gene Location: 120101-121150 bp Feature: gene Location: 121204-121851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: MCXQ01000047.1 Vibrio lentus strain 10N.261.52.F1 10N.261.52.F1_contig_8, whole genome shotgun sequence (55152 bp)
Overview 1 RT 1: 26531-31988 bp Neighborhood of RT #1 [26531, 31999] Big_1 Big_1 DUF1566 RVT-DGRs Avd_like trans_reg_C Feature: gene Location: 26531-29122 bp Feature: domain Description: Big_1 Location: 28112-28241 bp Feature: domain Description: Big_1 Location: 28112-2824 1 bp Feature: domain Description: Big_1 Location: 28349-28532 bp Feature: domain Description: Big_1 Location: 2834 9-28532 bp Feature: domain Description: DUF1566 Location: 28859-29111 bp Feature: domain Description: DUF1566 Location: 28859-29111 bp Feature: gene Location: 29211-29702 bp Feature: gene Location: 30064-31320 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30271-30973 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30271-30973 bp Feature: gene Location: 31300-31674 bp Feature: domain Description: Avd_like Location: 31330-31660 bp Feature: domain Description: Avd_like Location: 31330-31660 bp Feature: gene Location: 31706-31999 bp Feature: domain Description: trans_reg_C Location: 31769-31988 bp Feature: domain Description: trans_reg_C Location: 31769-31988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_1 (pfam02369), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), trans_reg_C (cd00383)