myRT

myRT report for GCA_002877685.1_ASM287768v1

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Seq: MCXO01000047.1 Vibrio breoganii strain 10N.261.52.F5 10N.261.52.F5_contig_2, whole genome shotgun sequence (4591 bp)
Overview 1 RT 1: 757-3686 bp Neighborhood of RT #1 [757, 3763] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 757-1017 bp Feature: gene Location: 1300-1431 bp Feature: gene Location: 1641-2954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1860-2475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 860-2475 bp Feature: domain Description: GIIM Note: maturase Location: 2526-2727 bp Feature: domain Description: GIIM Note: maturase Location: 2526-2727 bp Feature: gene Location: 2981-3124 bp Feature: gene Location: 3422-3763 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 3446-3686 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 3446-3686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)

Seq: MCXO01000052.1 Vibrio breoganii strain 10N.261.52.F5 10N.261.52.F5_contig_24, whole genome shotgun sequence (118788 bp)
Overview 1 RT 1: 77071-86688 bp Neighborhood of RT #1 [77071, 86729] DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 RVT-UNC Csx1_III-U YfaS Feature: gene Location: 77071-78819 bp Feature: domain Description: DEXXQc_Upf1-like Location: 77698-77854 bp Feature: domain Description: DEXXQc_Upf1-like Location: 77698-77854 bp Feature: domain Description: DEXXQc_Upf1-like Location: 78031-78283 bp Feature: domain Description: DEXXQc_Upf1-like Location: 78031-782 83 bp Feature: domain Description: KOG1803 Location: 78481-78733 bp Feature: domain Description: KOG1803 Location: 78481-78733 bp Feature: gene Location: 78897-79106 bp Feature: gene Location: 79156-80775 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79411-80056 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 79411-80056 bp Feature: gene Location: 80772-81905 bp Feature: domain Description: Csx1_III-U Location: 80775-81438 bp Feature: domain Description: Csx1_III-U Location: 80775-81438 bp Feature: gene Location: 82092-86729 bp Feature: domain Description: YfaS Location: 82416-86688 bp Feature: domain Description: YfaS Location: 82 416-86688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), RVT-UNC/RVT-UG23/RVT-UG19/RVT-UG9(RVT-UNC), Csx1_III-U (cl21570), YfaS (COG2373)

Seq: MCXO01000134.1 Vibrio breoganii strain 10N.261.52.F5 10N.261.52.F5_contig_99, whole genome shotgun sequence (535 bp)
Overview 1 RT 1: 1-406 bp Neighborhood of RT #1 [1, 408] RVT-GII Feature: gene Location: 1-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31-406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1-406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII