myRT

myRT report for GCA_002878245.1_ASM287824v1

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Seq: NKCY01000001.1 Komagataeibacter saccharivorans strain SRCM101450 contig00001, whole genome shotgun sequence (1453807 bp)
Overview 1 RT 1: 1410170-1414489 bp Neighborhood of RT #1 [1410170, 1414489] Tra5 RVT-UG5 HTH_Tnp_1 Feature: gene Location: 1410170-1410304 bp Feature: gene Location: 1410344-1410907 bp Feature: domain Description: Tra5 Location: 1410359-1410836 bp Feature: domain Description: Tra5 Location: 1 41 0359-1 41 0836 bp Feature: gene Location: 1411080-1413905 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1411272-1411770 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 41 1 272-1 41 1 770 bp Feature: gene Location: 1413942-1414208 bp Feature: domain Description: HTH_Tnp_1 Location: 1413948-1414155 bp Feature: domain Description: HTH_Tnp_1 Location: 1 41 3948-1 41 41 55 bp Feature: gene Location: 1414355-1414489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-UG5, HTH_Tnp_1 (pfam01527)

Seq: NKCY01000006.1 Komagataeibacter saccharivorans strain SRCM101450 contig00006, whole genome shotgun sequence (209755 bp)
Overview 1 RT 1: 57778-61532 bp Neighborhood of RT #1 [57778, 61532] DUF3085 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 57778-58047 bp Feature: gene Location: 58152-58460 bp Feature: domain Description: DUF3085 Location: 58179-58380 bp Feature: domain Description: DUF3085 Location: 58179-58380 bp Feature: gene Location: 58555-60414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58822-59668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5882 2 -59668 bp Feature: domain Description: Intron_maturas2 Location: 59761-60031 bp Feature: domain Description: Intron_maturas2 Location: 59761-60031 bp Feature: domain Description: HNHc Note: nucleases Location: 60214-60370 bp Feature: domain Description: HNHc Note: nucleases Location: 602 14-60370 bp Feature: gene Location: 61002-61229 bp Feature: gene Location: 61353-61532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3085 (pfam11284), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)