myRT

myRT report for GCA_002878675.1_ASM287867v1

Download annotations/find similar RTs

Seq: PNQX01000001.1 Glutamicibacter arilaitensis strain JB182 SAMN07141175.101, whole genome shotgun sequence (2242708 bp)
Overview 1 RT 1: 129698-135694 bp Neighborhood of RT #1 [129698, 135711] LMWPTP RhtB RVT-GII GIIM MarR YdfJ YdfJ Feature: gene Location: 129698-130159 bp Feature: domain Description: LMWPTP Location: 129701-130118 bp Feature: domain Description: LMWPTP Location: 1 29701 -1 301 1 8 bp Feature: gene Location: 130348-130890 bp Feature: domain Description: RhtB Location: 130351-130882 bp Feature: domain Description: RhtB Location: 1 30351 -1 30882 bp Feature: gene Location: 131366-132775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131714-132329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 71 4-1 32329 bp Feature: domain Description: GIIM Note: maturase Location: 132392-132614 bp Feature: domain Description: GIIM Note: maturase Location: 1 32392-1 3261 4 bp Feature: gene Location: 132951-133439 bp Feature: domain Description: MarR Location: 133086-133368 bp Feature: domain Description: MarR Location: 1 33086-1 33368 bp Feature: gene Location: 133489-135711 bp Feature: domain Description: YdfJ Location: 133660-134962 bp Feature: domain Description: YdfJ Location: 1 33660-1 34962 bp Feature: domain Description: YdfJ Location: 135058-135694 bp Feature: domain Description: YdfJ Location: 1 35058-1 35694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LMWPTP (cd16343), RhtB (COG1280), RVT-GII, GIIM (pfam08388), MarR (pfam01047), YdfJ (COG2409)

Seq: PNQX01000002.1 Glutamicibacter arilaitensis strain JB182 SAMN07141175.102, whole genome shotgun sequence (961077 bp)
Overview 1 RT 1: 472575-478112 bp Neighborhood of RT #1 [472575, 478291] PHA02517 InsE RVT-GII GIIM InsE PHA02517 RVT-GII Tra5 Feature: gene Location: 472575-473483 bp Feature: domain Description: PHA02517 Location: 472626-473424 bp Feature: domain Description: PHA02 517 Location: 472 62 6-47342 4 bp Feature: gene Location: 473483-473809 bp Feature: domain Description: InsE Location: 473495-473798 bp Feature: domain Description: InsE Location: 473495-473798 bp Feature: gene Location: 473869-474393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473872-474079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473872 -474079 bp Feature: domain Description: GIIM Note: maturase Location: 474142-474364 bp Feature: domain Description: GIIM Note: maturase Location: 474142 -474364 bp Feature: gene Location: 474457-474750 bp Feature: domain Description: InsE Location: 474463-474742 bp Feature: domain Description: InsE Location: 474463-474742 bp Feature: gene Location: 474804-475667 bp Feature: domain Description: PHA02517 Location: 474819-475641 bp Feature: domain Description: PHA02 517 Location: 474819-475641 bp Feature: gene Location: 475715-476458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476063-476456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476063-476456 bp Feature: gene Location: 476814-477251 bp Feature: gene Location: 477350-478291 bp Feature: domain Description: Tra5 Location: 477467-478112 bp Feature: domain Description: Tra5 Location: 477467-478112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)