myRT

myRT report for GCA_002880075.1_ASM288007v1

Download annotations/find similar RTs

Seq: POAY01000001.1 Vibrio parahaemolyticus strain ND22 contig1, whole genome shotgun sequence (692585 bp)
Overview 1 RT 1: 3306-6514 bp Neighborhood of RT #1 [3306, 6525] FixJ PRK11360 RVT-DGRs Avd_like Feature: gene Location: 3306-3902 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: gene Location: 3892-4638 bp Feature: domain Description: PRK11360 Location: 3952-4630 bp Feature: domain Description: PRK1 1 360 Location: 3952-4630 bp Feature: gene Location: 4829-5869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5021-5645 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5021 -5645 bp Feature: gene Location: 5968-6117 bp Feature: gene Location: 6139-6525 bp Feature: domain Description: Avd_like Location: 6208-6514 bp Feature: domain Description: Avd_like Location: 6208-651 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FixJ (COG4566), PRK11360 (two-component system sensor histidine kinase AtoS), RVT-DGRs, Avd_like (cd16376)

Seq: POAY01000018.1 Vibrio parahaemolyticus strain ND22 contig18, whole genome shotgun sequence (105861 bp)
Overview 1 RT 1: 11283-17062 bp Neighborhood of RT #1 [11283, 17062] AAA_15 AAA_15 RVT-UG2 PinE Feature: gene Location: 11283-13160 bp Feature: domain Description: AAA_15 Location: 11286-11562 bp Feature: domain Description: AAA_15 Location: 112 86-11562 bp Feature: domain Description: AAA_15 Location: 12057-12396 bp Feature: domain Description: AAA_15 Location: 12 057-12 396 bp Feature: gene Location: 13607-13747 bp Feature: gene Location: 13911-15221 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14112-14925 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14112 -1492 5 bp Feature: gene Location: 15553-16143 bp Feature: domain Description: PinE Location: 15562-16123 bp Feature: domain Description: PinE Location: 15562 -1612 3 bp Feature: gene Location: 16775-17062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG2, PinE (COG1961)