myRT

myRT report for GCA_002880255.1_ASM288025v1

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Seq: POBI01000001.1 Vibrio parahaemolyticus strain ND12 contig1, whole genome shotgun sequence (550054 bp)
Overview 1 RT 1: 14720-18105 bp Neighborhood of RT #1 [14720, 18116] RhtB siderophore_interacting RVT-DGRs Avd_like Feature: gene Location: 14720-15304 bp Feature: domain Description: RhtB Location: 14723-15299 bp Feature: domain Description: RhtB Location: 1 4723-1 5299 bp Feature: gene Location: 15483-16202 bp Feature: domain Description: siderophore_interacting Location: 15519-16167 bp Feature: domain Description: siderophore_interacting Location: 1 551 9-1 61 67 bp Feature: gene Location: 16420-17460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16612-17236 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 661 2-1 7236 bp Feature: gene Location: 17559-17708 bp Feature: gene Location: 17730-18116 bp Feature: domain Description: Avd_like Location: 17799-18105 bp Feature: domain Description: Avd_like Location: 1 7799-1 81 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhtB (COG1280), siderophore_interacting (cd06193), RVT-DGRs, Avd_like (cd16376)

Seq: POBI01000020.1 Vibrio parahaemolyticus strain ND12 contig20, whole genome shotgun sequence (105861 bp)
Overview 1 RT 1: 11283-17062 bp Neighborhood of RT #1 [11283, 17062] AAA_15 AAA_15 RVT-UG2 PinE Feature: gene Location: 11283-13160 bp Feature: domain Description: AAA_15 Location: 11286-11562 bp Feature: domain Description: AAA_15 Location: 112 86-11562 bp Feature: domain Description: AAA_15 Location: 12057-12396 bp Feature: domain Description: AAA_15 Location: 12 057-12 396 bp Feature: gene Location: 13607-13747 bp Feature: gene Location: 13911-15221 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14112-14925 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14112 -1492 5 bp Feature: gene Location: 15553-16143 bp Feature: domain Description: PinE Location: 15562-16123 bp Feature: domain Description: PinE Location: 15562 -1612 3 bp Feature: gene Location: 16775-17062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG2, PinE (COG1961)