myRT

myRT report for GCA_002880275.1_ASM288027v1

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Seq: POBJ01000019.1 Vibrio parahaemolyticus strain ND11 contig19, whole genome shotgun sequence (105340 bp)
Overview 1 RT 1: 10849-16628 bp Neighborhood of RT #1 [10849, 16628] AAA_15 AAA_15 RVT-UG2 PinE Feature: gene Location: 10849-12726 bp Feature: domain Description: AAA_15 Location: 10852-11128 bp Feature: domain Description: AAA_1 5 Location: 1 0852-1 1 1 28 bp Feature: domain Description: AAA_15 Location: 11623-11962 bp Feature: domain Description: AAA_1 5 Location: 1 1 623-1 1 962 bp Feature: gene Location: 13173-13313 bp Feature: gene Location: 13477-14787 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13678-14491 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 3678-1 4491 bp Feature: gene Location: 15119-15709 bp Feature: domain Description: PinE Location: 15128-15689 bp Feature: domain Description: PinE Location: 1 51 28-1 5689 bp Feature: gene Location: 16341-16628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG2, PinE (COG1961)

Seq: POBJ01000007.1 Vibrio parahaemolyticus strain ND11 contig7, whole genome shotgun sequence (246929 bp)
Overview 1 RT 1: 3306-6427 bp Neighborhood of RT #1 [3306, 6438] FixJ PRK11360 RVT-DGRs Avd_like Feature: gene Location: 3306-3902 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: gene Location: 3892-4638 bp Feature: domain Description: PRK11360 Location: 3952-4630 bp Feature: domain Description: PRK11360 Location: 3952 -4630 bp Feature: gene Location: 4829-5869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5021-5645 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 502 1-5645 bp Feature: gene Location: 5968-6117 bp Feature: gene Location: 6139-6438 bp Feature: domain Description: Avd_like Location: 6142-6427 bp Feature: domain Description: Avd_like Location: 6142 -642 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FixJ (COG4566), PRK11360 (two-component system sensor histidine kinase AtoS), RVT-DGRs, Avd_like (cd16376)