myRT

myRT report for GCA_002880555.1_ASM288055v1

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Seq: POBY01000009.1 Vibrio parahaemolyticus strain MVP5 contig9, whole genome shotgun sequence (192258 bp)
Overview 1 RT 1: 177215-181232 bp 2 RT 2: 186673-192138 bp Neighborhood of RT #1 [177215, 181232] PRK05658 RVT-Retrons HTH_XRE Neighborhood of RT #2 [186673, 192138] UvrD UvrD UvrD RVT-Retrons Feature: gene Location: 177215-179077 bp Feature: domain Description: PRK05658 Location: 177221-179075 bp Feature: domain Description: PRK05658 Location: 1 77221 -1 79075 bp Feature: gene Location: 179335-179571 bp Feature: gene Location: 179600-180559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 179774-180329 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 79774-1 80329 bp Feature: gene Location: 180540-180845 bp Feature: domain Description: HTH_XRE Location: 180555-180717 bp Feature: domain Description: HTH_XRE Location: 1 80555-1 8071 7 bp Feature: gene Location: 180885-181232 bp Feature: gene Location: 186673-188319 bp Feature: domain Description: UvrD Location: 186736-186997 bp Feature: domain Description: UvrD Location: 1 86736-1 86997 bp Feature: domain Description: UvrD Location: 187060-187774 bp Feature: domain Description: UvrD Location: 1 87060-1 87774 bp Feature: domain Description: UvrD Location: 187966-188305 bp Feature: domain Description: UvrD Location: 1 87966-1 88305 bp Feature: gene Location: 188571-189836 bp Feature: gene Location: 190002-191186 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 190257-190914 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 90257-1 9091 4 bp Feature: gene Location: 191434-192138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-Retrons, HTH_XRE (smart00530), UvrD (COG0210)