myRT

myRT report for GCA_002880575.1_ASM288057v1

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Seq: POBW01000019.1 Vibrio parahaemolyticus strain NA1 contig19, whole genome shotgun sequence (105861 bp)
Overview 1 RT 1: 11283-17062 bp Neighborhood of RT #1 [11283, 17062] AAA_15 AAA_15 RVT-UG2 PinE Feature: gene Location: 11283-13160 bp Feature: domain Description: AAA_15 Location: 11286-11562 bp Feature: domain Description: AAA_1 5 Location: 1 1 286-1 1 562 bp Feature: domain Description: AAA_15 Location: 12057-12396 bp Feature: domain Description: AAA_1 5 Location: 1 2057-1 2396 bp Feature: gene Location: 13607-13747 bp Feature: gene Location: 13911-15221 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 14112-14925 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 41 1 2-1 4925 bp Feature: gene Location: 15553-16143 bp Feature: domain Description: PinE Location: 15562-16123 bp Feature: domain Description: PinE Location: 1 5562-1 61 23 bp Feature: gene Location: 16775-17062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG2, PinE (COG1961)

Seq: POBW01000004.1 Vibrio parahaemolyticus strain NA1 contig4, whole genome shotgun sequence (374919 bp)
Overview 1 RT 1: 3306-6427 bp Neighborhood of RT #1 [3306, 6438] FixJ PRK11360 RVT-DGRs Avd_like Feature: gene Location: 3306-3902 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: domain Description: FixJ Location: 3330-3888 bp Feature: gene Location: 3892-4638 bp Feature: domain Description: PRK11360 Location: 3952-4630 bp Feature: domain Description: PRK11360 Location: 3952 -4630 bp Feature: gene Location: 4829-5869 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5021-5645 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 502 1-5645 bp Feature: gene Location: 5968-6117 bp Feature: gene Location: 6139-6438 bp Feature: domain Description: Avd_like Location: 6142-6427 bp Feature: domain Description: Avd_like Location: 6142 -642 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FixJ (COG4566), PRK11360 (two-component system sensor histidine kinase AtoS), RVT-DGRs, Avd_like (cd16376)