myRT

myRT report for GCA_002880595.1_ASM288059v1

Download annotations/find similar RTs

Seq: POBZ01000008.1 Vibrio parahaemolyticus strain MVP3 contig8, whole genome shotgun sequence (192654 bp)
Overview 1 RT 1: 177520-181537 bp 2 RT 2: 186978-192652 bp Neighborhood of RT #1 [177520, 181537] PRK05658 RVT-Retrons HTH_XRE Neighborhood of RT #2 [186978, 192652] UvrD UvrD UvrD RVT-Retrons Feature: gene Location: 177520-179382 bp Feature: domain Description: PRK05658 Location: 177526-179380 bp Feature: domain Description: PRK05658 Location: 1 77526-1 79380 bp Feature: gene Location: 179640-179876 bp Feature: gene Location: 179905-180864 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 180079-180634 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 80079-1 80634 bp Feature: gene Location: 180845-181150 bp Feature: domain Description: HTH_XRE Location: 180860-181022 bp Feature: domain Description: HTH_XRE Location: 1 80860-1 81 022 bp Feature: gene Location: 181190-181537 bp Feature: gene Location: 186978-188624 bp Feature: domain Description: UvrD Location: 187041-187302 bp Feature: domain Description: UvrD Location: 1 87041 -1 87302 bp Feature: domain Description: UvrD Location: 187365-188079 bp Feature: domain Description: UvrD Location: 1 87365-1 88079 bp Feature: domain Description: UvrD Location: 188271-188610 bp Feature: domain Description: UvrD Location: 1 88271 -1 8861 0 bp Feature: gene Location: 188876-190141 bp Feature: gene Location: 190307-191491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 190562-191219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 90562-1 91 21 9 bp Feature: gene Location: 191739-192443 bp Feature: gene Location: 192527-192652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-Retrons, HTH_XRE (smart00530), UvrD (COG0210)