myRT

myRT report for GCA_002881675.1_GP01-A8

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Seq: PODQ01000026.1 Pseudomonas sp. GP01-A8 NODE_26_length_73666_cov_26.7895, whole genome shotgun sequence (73666 bp)
Overview 1 RT 1: 20168-25410 bp Neighborhood of RT #1 [20168, 25439] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 20168-21130 bp Feature: domain Description: ACR3 Location: 20183-21110 bp Feature: domain Description: ACR3 Location: 201 83-21 1 1 0 bp Feature: gene Location: 21169-21303 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21175-21286 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 1 75-21 286 bp Feature: gene Location: 21495-23156 bp Feature: RT Description: RVT_N Location: 21540-21783 bp Feature: RT Description: RVT_N Location: 21 540-21 783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21828-22464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 828-22464 bp Feature: domain Description: GIIM Note: maturase Location: 22521-22749 bp Feature: domain Description: GIIM Note: maturase Location: 22521 -22749 bp Feature: gene Location: 23714-25042 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23846-24053 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23846-24053 bp Feature: domain Description: zf-IS66 Location: 24092-24206 bp Feature: domain Description: zf-IS66 Location: 24092-24206 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24248-25022 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24248-25022 bp Feature: gene Location: 25104-25439 bp Feature: domain Description: TnpB_IS66 Location: 25122-25410 bp Feature: domain Description: TnpB_IS66 Location: 251 22-2541 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)