myRT

myRT report for GCA_002881785.1_GP01-A14

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Seq: PODS01000011.1 Pseudomonas sp. GP01-A14 NODE_11_length_72723_cov_11.1061, whole genome shotgun sequence (72723 bp)
Overview 1 RT 1: 48140-53391 bp Neighborhood of RT #1 [48140, 53411] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 48140-48475 bp Feature: domain Description: TnpB_IS66 Location: 48158-48446 bp Feature: domain Description: TnpB_IS66 Location: 481 58-48446 bp Feature: gene Location: 48537-49865 bp Feature: domain Description: LZ_Tnp_IS66 Location: 48669-48876 bp Feature: domain Description: LZ_Tnp_IS66 Location: 48669-48876 bp Feature: domain Description: zf-IS66 Location: 48915-49029 bp Feature: domain Description: zf-IS66 Location: 4891 5-49029 bp Feature: domain Description: DDE_Tnp_IS66 Location: 49071-49845 bp Feature: domain Description: DDE_Tnp_IS66 Location: 49071 -49845 bp Feature: gene Location: 50423-52084 bp Feature: RT Description: RVT_N Location: 50468-50711 bp Feature: RT Description: RVT_N Location: 50468-5071 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50756-51392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50756-51 392 bp Feature: domain Description: GIIM Note: maturase Location: 51449-51677 bp Feature: domain Description: GIIM Note: maturase Location: 51 449-51 677 bp Feature: gene Location: 52276-52410 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 52282-52393 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 52282-52393 bp Feature: gene Location: 52449-53411 bp Feature: domain Description: ACR3 Location: 52464-53391 bp Feature: domain Description: ACR3 Location: 52464-53391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)