myRT

myRT report for GCA_002881845.1_GP01-A4

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Seq: PODW01000013.1 Pseudomonas sp. GP01-A4 NODE_13_length_105089_cov_37.879, whole genome shotgun sequence (105089 bp)
Overview 1 RT 1: 20162-25404 bp Neighborhood of RT #1 [20162, 25433] ACR3 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 20162-21124 bp Feature: domain Description: ACR3 Location: 20177-21104 bp Feature: domain Description: ACR3 Location: 201 77-21 1 04 bp Feature: gene Location: 21163-21297 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21169-21280 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 1 69-21 280 bp Feature: gene Location: 21489-23150 bp Feature: RT Description: RVT_N Location: 21534-21777 bp Feature: RT Description: RVT_N Location: 21 534-21 777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21822-22458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 822-22458 bp Feature: domain Description: GIIM Note: maturase Location: 22515-22743 bp Feature: domain Description: GIIM Note: maturase Location: 2251 5-22743 bp Feature: gene Location: 23708-25036 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23840-24047 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23840-24047 bp Feature: domain Description: zf-IS66 Location: 24086-24200 bp Feature: domain Description: zf-IS66 Location: 24086-24200 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24242-25016 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24242-2501 6 bp Feature: gene Location: 25098-25433 bp Feature: domain Description: TnpB_IS66 Location: 25116-25404 bp Feature: domain Description: TnpB_IS66 Location: 251 1 6-25404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)