myRT

myRT report for GCA_002882075.1_GW460-C8

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Seq: POEO01000107.1 Pseudomonas sp. GW460-C8 NODE_107_length_1842_cov_66.1439, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POEO01000023.1 Pseudomonas sp. GW460-C8 NODE_23_length_119390_cov_38.6365, whole genome shotgun sequence (119390 bp)
Overview 1 RT 1: 88915-92256 bp Neighborhood of RT #1 [88915, 92270] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88915-89382 bp Feature: gene Location: 89351-90790 bp Feature: domain Description: Resolvase Location: 89372-89810 bp Feature: domain Description: Resolvase Location: 89372 -89810 bp Feature: domain Description: Recombinase Location: 89906-90263 bp Feature: domain Description: Recombinase Location: 89906-902 63 bp Feature: domain Description: Zn_ribbon_recom Location: 90302-90506 bp Feature: domain Description: Zn_ribbon_recom Location: 90302 -90506 bp Feature: gene Location: 91128-91376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91131-91353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91131-91353 bp Feature: gene Location: 91547-91756 bp Feature: gene Location: 91938-92270 bp Feature: domain Description: DUF2790 Location: 92028-92256 bp Feature: domain Description: DUF2 790 Location: 92 02 8-92 2 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POEO01000058.1 Pseudomonas sp. GW460-C8 NODE_58_length_36931_cov_39.4921, whole genome shotgun sequence (36931 bp)
Overview 1 RT 1: 28314-32199 bp Neighborhood of RT #1 [28314, 32199] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 28314-28466 bp Feature: gene Location: 28507-30402 bp Feature: domain Description: Resolvase Location: 28528-28966 bp Feature: domain Description: Resolvase Location: 28528-28966 bp Feature: domain Description: Recombinase Location: 29062-29419 bp Feature: domain Description: Recombinase Location: 29062-29419 bp Feature: domain Description: Zn_ribbon_recom Location: 29458-29662 bp Feature: domain Description: Zn_ribbon_recom Location: 29458-29662 bp Feature: gene Location: 30653-31702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30725-30998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0725-3 0998 bp Feature: domain Description: GIIM Note: maturase Location: 31055-31283 bp Feature: domain Description: GIIM Note: maturase Location: 3 1055-3 1283 bp Feature: gene Location: 31882-32016 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31888-31999 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3 1888-3 1999 bp Feature: gene Location: 32020-32199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)