myRT

myRT report for GCA_002882295.1_GW101-20A5

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Seq: POFE01000125.1 Pseudomonas sp. GW101-20A5 NODE_125_length_1842_cov_57.3666, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFE01000031.1 Pseudomonas sp. GW101-20A5 NODE_31_length_94587_cov_42.3758, whole genome shotgun sequence (94587 bp)
Overview 1 RT 1: 27115-30470 bp Neighborhood of RT #1 [27115, 30470] DUF2790 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 27115-27447 bp Feature: domain Description: DUF2790 Location: 27205-27433 bp Feature: domain Description: DUF2 790 Location: 2 72 05-2 7433 bp Feature: gene Location: 27629-27880 bp Feature: gene Location: 28009-28257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28012-28234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8012 -2 82 34 bp Feature: gene Location: 28595-30034 bp Feature: domain Description: Resolvase Location: 28616-29054 bp Feature: domain Description: Resolvase Location: 2 8616-2 9054 bp Feature: domain Description: Recombinase Location: 29150-29507 bp Feature: domain Description: Recombinase Location: 2 9150-2 9507 bp Feature: domain Description: Zn_ribbon_recom Location: 29546-29750 bp Feature: domain Description: Zn_ribbon_recom Location: 2 9546-2 9750 bp Feature: gene Location: 30003-30470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2790 (pfam10976), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: POFE01000004.1 Pseudomonas sp. GW101-20A5 NODE_4_length_213818_cov_37.8956, whole genome shotgun sequence (213818 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-503 3 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 02-5575 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 563 2-5860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)