myRT

myRT report for GCA_002882315.1_GW460-8

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Seq: POFH01000107.1 Pseudomonas sp. GW460-8 NODE_107_length_1842_cov_78.0714, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 90-1838 bp Neighborhood of RT #1 [90, 1838] RVT-GII GIIM Feature: gene Location: 90-1382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 -966 bp Feature: domain Description: GIIM Note: maturase Location: 1020-1224 bp Feature: domain Description: GIIM Note: maturase Location: 1 020-1 224 bp Feature: gene Location: 1461-1838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFH01000010.1 Pseudomonas sp. GW460-8 NODE_10_length_150804_cov_44.5631, whole genome shotgun sequence (150804 bp)
Overview 1 RT 1: 142187-146072 bp Neighborhood of RT #1 [142187, 146072] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 142187-142339 bp Feature: gene Location: 142380-144275 bp Feature: domain Description: Resolvase Location: 142401-142839 bp Feature: domain Description: Resolvase Location: 142 401-142 839 bp Feature: domain Description: Recombinase Location: 142935-143292 bp Feature: domain Description: Recombinase Location: 142 935-1432 92 bp Feature: domain Description: Zn_ribbon_recom Location: 143331-143535 bp Feature: domain Description: Zn_ribbon_recom Location: 143331-143535 bp Feature: gene Location: 144526-145575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144598-144871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144598-144871 bp Feature: domain Description: GIIM Note: maturase Location: 144928-145156 bp Feature: domain Description: GIIM Note: maturase Location: 14492 8-145156 bp Feature: gene Location: 145755-145889 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 145761-145872 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 145761-145872 bp Feature: gene Location: 145893-146072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: POFH01000018.1 Pseudomonas sp. GW460-8 NODE_18_length_132119_cov_49.4855, whole genome shotgun sequence (132119 bp)
Overview 1 RT 1: 101644-104985 bp Neighborhood of RT #1 [101644, 104999] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 101644-102111 bp Feature: gene Location: 102080-103519 bp Feature: domain Description: Resolvase Location: 102101-102539 bp Feature: domain Description: Resolvase Location: 102101-10253 9 bp Feature: domain Description: Recombinase Location: 102635-102992 bp Feature: domain Description: Recombinase Location: 10263 5-102992 bp Feature: domain Description: Zn_ribbon_recom Location: 103031-103235 bp Feature: domain Description: Zn_ribbon_recom Location: 103 03 1-103 23 5 bp Feature: gene Location: 103857-104105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103860-104082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 860-104082 bp Feature: gene Location: 104276-104485 bp Feature: gene Location: 104667-104999 bp Feature: domain Description: DUF2790 Location: 104757-104985 bp Feature: domain Description: DUF2790 Location: 104757-104985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)