myRT

myRT report for GCA_002882335.1_GW460-E13

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Seq: POFK01000108.1 Pseudomonas sp. GW460-E13 NODE_108_length_1842_cov_68.8912, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFK01000011.1 Pseudomonas sp. GW460-E13 NODE_11_length_150805_cov_40.594, whole genome shotgun sequence (150805 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 492 2 -5033 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302 -5575 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 5632 -5860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: POFK01000019.1 Pseudomonas sp. GW460-E13 NODE_19_length_119399_cov_44.7995, whole genome shotgun sequence (119399 bp)
Overview 1 RT 1: 88930-92271 bp Neighborhood of RT #1 [88930, 92285] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88930-89397 bp Feature: gene Location: 89366-90805 bp Feature: domain Description: Resolvase Location: 89387-89825 bp Feature: domain Description: Resolvase Location: 893 87-89825 bp Feature: domain Description: Recombinase Location: 89921-90278 bp Feature: domain Description: Recombinase Location: 89921-90278 bp Feature: domain Description: Zn_ribbon_recom Location: 90317-90521 bp Feature: domain Description: Zn_ribbon_recom Location: 903 17-90521 bp Feature: gene Location: 91143-91391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-91368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-913 68 bp Feature: gene Location: 91562-91771 bp Feature: gene Location: 91953-92285 bp Feature: domain Description: DUF2790 Location: 92043-92271 bp Feature: domain Description: DUF2790 Location: 92043 -92271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)