myRT

myRT report for GCA_002882415.1_GW456-11-11-14-LB2

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Seq: POFM01000011.1 Pseudomonas sp. GW456-11-11-14-LB2 NODE_11_length_119397_cov_22.5596, whole genome shotgun sequence (119397 bp)
Overview 1 RT 1: 88932-92273 bp Neighborhood of RT #1 [88932, 92287] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88932-89399 bp Feature: gene Location: 89368-90807 bp Feature: domain Description: Resolvase Location: 89389-89827 bp Feature: domain Description: Resolvase Location: 89389-89827 bp Feature: domain Description: Recombinase Location: 89923-90280 bp Feature: domain Description: Recombinase Location: 89923-90280 bp Feature: domain Description: Zn_ribbon_recom Location: 90319-90523 bp Feature: domain Description: Zn_ribbon_recom Location: 9031 9-90523 bp Feature: gene Location: 91145-91393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91148-91370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 48-91 370 bp Feature: gene Location: 91564-91773 bp Feature: gene Location: 91955-92287 bp Feature: domain Description: DUF2790 Location: 92045-92273 bp Feature: domain Description: DUF2790 Location: 92045-92273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POFM01000176.1 Pseudomonas sp. GW456-11-11-14-LB2 NODE_176_length_1842_cov_35.0612, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 2 -1337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFM01000003.1 Pseudomonas sp. GW456-11-11-14-LB2 NODE_3_length_150811_cov_20.2498, whole genome shotgun sequence (150811 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-503 3 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 02-5575 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 563 2-5860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)