myRT

myRT report for GCA_002882875.1_MPBD4-3

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Seq: POEA01000027.1 Pseudomonas sp. MPBD4-3 NODE_27_length_66695_cov_12.7448, whole genome shotgun sequence (66695 bp)
Overview 1 RT 1: 13144-19833 bp Neighborhood of RT #1 [13144, 19865] zntA HMA P-type_ATPase_Cd-like DDE_Tnp_IS66_C RVT_N RVT-GII GIIM DDE_Tnp_IS66 XerC Feature: gene Location: 13144-15549 bp Feature: domain Description: zntA Location: 13204-13462 bp Feature: domain Description: zntA Location: 1 3204-1 3462 bp Feature: domain Description: HMA Location: 13468-13636 bp Feature: domain Description: HMA Location: 1 3468-1 3636 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 13774-15544 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 1 3774-1 5544 bp Feature: gene Location: 15622-15756 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 15628-15733 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 5628-1 5733 bp Feature: gene Location: 15948-17609 bp Feature: RT Description: RVT_N Location: 15993-16236 bp Feature: RT Description: RVT_N Location: 1 5993-1 6236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16281-16917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6281 -1 691 7 bp Feature: domain Description: GIIM Note: maturase Location: 16974-17202 bp Feature: domain Description: GIIM Note: maturase Location: 1 6974-1 7202 bp Feature: gene Location: 18167-18301 bp Feature: domain Description: DDE_Tnp_IS66 Location: 18176-18281 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 81 76-1 8281 bp Feature: gene Location: 18714-19865 bp Feature: domain Description: XerC Location: 18930-19833 bp Feature: domain Description: XerC Location: 1 8930-1 9833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zntA (PRK11033), HMA (pfam00403), P-type_ATPase_Cd-like (cd07545), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), XerC (COG4973)