myRT

myRT report for GCA_002883035.1_GW456-E6

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Seq: POEQ01000011.1 Pseudomonas sp. GW456-E6 NODE_11_length_176266_cov_41.4591, whole genome shotgun sequence (176266 bp)
Overview 1 RT 1: 167649-171534 bp Neighborhood of RT #1 [167649, 171534] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 167649-167801 bp Feature: gene Location: 167842-169737 bp Feature: domain Description: Resolvase Location: 167863-168301 bp Feature: domain Description: Resolvase Location: 1 67863-1 68301 bp Feature: domain Description: Recombinase Location: 168397-168754 bp Feature: domain Description: Recombinase Location: 1 68397-1 68754 bp Feature: domain Description: Zn_ribbon_recom Location: 168793-168997 bp Feature: domain Description: Zn_ribbon_recom Location: 1 68793-1 68997 bp Feature: gene Location: 169988-171037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170060-170333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70060-1 70333 bp Feature: domain Description: GIIM Note: maturase Location: 170390-170618 bp Feature: domain Description: GIIM Note: maturase Location: 1 70390-1 7061 8 bp Feature: gene Location: 171217-171351 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 171223-171334 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 71 223-1 71 334 bp Feature: gene Location: 171355-171534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: POEQ01000017.1 Pseudomonas sp. GW456-E6 NODE_17_length_119399_cov_46.5558, whole genome shotgun sequence (119399 bp)
Overview 1 RT 1: 88930-92271 bp Neighborhood of RT #1 [88930, 92285] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88930-89397 bp Feature: gene Location: 89366-90805 bp Feature: domain Description: Resolvase Location: 89387-89825 bp Feature: domain Description: Resolvase Location: 89387-8982 5 bp Feature: domain Description: Recombinase Location: 89921-90278 bp Feature: domain Description: Recombinase Location: 8992 1-902 78 bp Feature: domain Description: Zn_ribbon_recom Location: 90317-90521 bp Feature: domain Description: Zn_ribbon_recom Location: 90317-9052 1 bp Feature: gene Location: 91143-91391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-91368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-91368 bp Feature: gene Location: 91562-91771 bp Feature: gene Location: 91953-92285 bp Feature: domain Description: DUF2790 Location: 92043-92271 bp Feature: domain Description: DUF2 790 Location: 92 043-92 2 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POEQ01000097.1 Pseudomonas sp. GW456-E6 NODE_97_length_1842_cov_75.762, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-13 3 7 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 13 91-1595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)