myRT

myRT report for GCA_002883055.1_GW460-C2

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Seq: POEV01000105.1 Pseudomonas sp. GW460-C2 NODE_105_length_1842_cov_61.8266, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POEV01000029.1 Pseudomonas sp. GW460-C2 NODE_29_length_94587_cov_44.4642, whole genome shotgun sequence (94587 bp)
Overview 1 RT 1: 64118-67459 bp Neighborhood of RT #1 [64118, 67473] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 64118-64585 bp Feature: gene Location: 64554-65993 bp Feature: domain Description: Resolvase Location: 64575-65013 bp Feature: domain Description: Resolvase Location: 64575-65013 bp Feature: domain Description: Recombinase Location: 65109-65466 bp Feature: domain Description: Recombinase Location: 65109-65466 bp Feature: domain Description: Zn_ribbon_recom Location: 65505-65709 bp Feature: domain Description: Zn_ribbon_recom Location: 65505-65709 bp Feature: gene Location: 66331-66579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66334-66556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66334-66556 bp Feature: gene Location: 66750-66959 bp Feature: gene Location: 67141-67473 bp Feature: domain Description: DUF2790 Location: 67231-67459 bp Feature: domain Description: DUF2 790 Location: 672 31-67459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POEV01000005.1 Pseudomonas sp. GW460-C2 NODE_5_length_213536_cov_40.8411, whole genome shotgun sequence (213536 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-503 3 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 02-5575 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 563 2-5860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)