myRT

myRT report for GCA_002883155.1_GW460-13

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Seq: POEP01000102.1 Pseudomonas sp. GW460-13 NODE_102_length_1842_cov_71.855, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POEP01001228.1 Pseudomonas sp. GW460-13 NODE_1229_length_240_cov_0.895706, whole genome shotgun sequence (240 bp)
Overview 1 RT 1: 3-234 bp Neighborhood of RT #1 [3, 239] RVT-GII Feature: gene Location: 3-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-2 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: POEP01000025.1 Pseudomonas sp. GW460-13 NODE_25_length_107580_cov_41.8904, whole genome shotgun sequence (107580 bp)
Overview 1 RT 1: 15296-18651 bp Neighborhood of RT #1 [15296, 18651] DUF2790 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 15296-15628 bp Feature: domain Description: DUF2790 Location: 15386-15614 bp Feature: domain Description: DUF2790 Location: 153 86-15614 bp Feature: gene Location: 15810-16019 bp Feature: gene Location: 16190-16438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16193-16415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16193 -16415 bp Feature: gene Location: 16776-18215 bp Feature: domain Description: Resolvase Location: 16797-17235 bp Feature: domain Description: Resolvase Location: 16797-1723 5 bp Feature: domain Description: Recombinase Location: 17331-17688 bp Feature: domain Description: Recombinase Location: 173 3 1-17688 bp Feature: domain Description: Zn_ribbon_recom Location: 17727-17931 bp Feature: domain Description: Zn_ribbon_recom Location: 17727-1793 1 bp Feature: gene Location: 18184-18651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2790 (pfam10976), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: POEP01000476.1 Pseudomonas sp. GW460-13 NODE_476_length_287_cov_0.67619, whole genome shotgun sequence (287 bp)
Overview 1 RT 1: 1-283 bp Neighborhood of RT #1 [1, 285] RVT-GII Feature: gene Location: 1-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: POEP01000006.1 Pseudomonas sp. GW460-13 NODE_6_length_213536_cov_36.7596, whole genome shotgun sequence (213536 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5 033 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 302-5 5 75 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 5 632-5 860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 65 5 1-6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085 -7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)