myRT

myRT report for GCA_002883175.1_MPR-AND1A

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Seq: POEZ01000031.1 Pseudomonas sp. MPR-AND1A NODE_31_length_94587_cov_46.0287, whole genome shotgun sequence (94587 bp)
Overview 1 RT 1: 64118-67459 bp Neighborhood of RT #1 [64118, 67473] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 64118-64585 bp Feature: gene Location: 64554-65993 bp Feature: domain Description: Resolvase Location: 64575-65013 bp Feature: domain Description: Resolvase Location: 64575-6501 3 bp Feature: domain Description: Recombinase Location: 65109-65466 bp Feature: domain Description: Recombinase Location: 651 09-65466 bp Feature: domain Description: Zn_ribbon_recom Location: 65505-65709 bp Feature: domain Description: Zn_ribbon_recom Location: 65505-65709 bp Feature: gene Location: 66331-66579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66334-66556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66334-66556 bp Feature: gene Location: 66750-66959 bp Feature: gene Location: 67141-67473 bp Feature: domain Description: DUF2790 Location: 67231-67459 bp Feature: domain Description: DUF2790 Location: 67231 -67459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POEZ01000008.1 Pseudomonas sp. MPR-AND1A NODE_8_length_176286_cov_40.9684, whole genome shotgun sequence (176286 bp)
Overview 1 RT 1: 167669-171554 bp Neighborhood of RT #1 [167669, 171554] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 167669-167821 bp Feature: gene Location: 167862-169757 bp Feature: domain Description: Resolvase Location: 167883-168321 bp Feature: domain Description: Resolvase Location: 167883-16832 1 bp Feature: domain Description: Recombinase Location: 168417-168774 bp Feature: domain Description: Recombinase Location: 168417-168774 bp Feature: domain Description: Zn_ribbon_recom Location: 168813-169017 bp Feature: domain Description: Zn_ribbon_recom Location: 168813-169017 bp Feature: gene Location: 170008-171057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170080-170353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170080-170353 bp Feature: domain Description: GIIM Note: maturase Location: 170410-170638 bp Feature: domain Description: GIIM Note: maturase Location: 170410-170638 bp Feature: gene Location: 171237-171371 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 171243-171354 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1712 43-171354 bp Feature: gene Location: 171375-171554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: POEZ01000098.1 Pseudomonas sp. MPR-AND1A NODE_98_length_1842_cov_69.668, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-13 3 7 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 13 91-1595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)