myRT

myRT report for GCA_002883195.1_GW460-C3

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Seq: POFA01000109.1 Pseudomonas sp. GW460-C3 NODE_109_length_1842_cov_64.7445, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1 337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1 391 -1 595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFA01000010.1 Pseudomonas sp. GW460-C3 NODE_10_length_150812_cov_31.2087, whole genome shotgun sequence (150812 bp)
Overview 1 RT 1: 142195-146080 bp Neighborhood of RT #1 [142195, 146080] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 142195-142347 bp Feature: gene Location: 142388-144283 bp Feature: domain Description: Resolvase Location: 142409-142847 bp Feature: domain Description: Resolvase Location: 142 409-142 847 bp Feature: domain Description: Recombinase Location: 142943-143300 bp Feature: domain Description: Recombinase Location: 142 943-143300 bp Feature: domain Description: Zn_ribbon_recom Location: 143339-143543 bp Feature: domain Description: Zn_ribbon_recom Location: 143339-143543 bp Feature: gene Location: 144534-145583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144606-144879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144606-144879 bp Feature: domain Description: GIIM Note: maturase Location: 144936-145164 bp Feature: domain Description: GIIM Note: maturase Location: 144936-145164 bp Feature: gene Location: 145763-145897 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 145769-145880 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 145769-145880 bp Feature: gene Location: 145901-146080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)

Seq: POFA01000031.1 Pseudomonas sp. GW460-C3 NODE_31_length_94587_cov_34.3569, whole genome shotgun sequence (94587 bp)
Overview 1 RT 1: 27115-30470 bp Neighborhood of RT #1 [27115, 30470] DUF2790 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 27115-27447 bp Feature: domain Description: DUF2790 Location: 27205-27433 bp Feature: domain Description: DUF2790 Location: 27205-2743 3 bp Feature: gene Location: 27629-27880 bp Feature: gene Location: 28009-28257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28012-28234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28012-2823 4 bp Feature: gene Location: 28595-30034 bp Feature: domain Description: Resolvase Location: 28616-29054 bp Feature: domain Description: Resolvase Location: 28616-29054 bp Feature: domain Description: Recombinase Location: 29150-29507 bp Feature: domain Description: Recombinase Location: 29150-29507 bp Feature: domain Description: Zn_ribbon_recom Location: 29546-29750 bp Feature: domain Description: Zn_ribbon_recom Location: 29546-29750 bp Feature: gene Location: 30003-30470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2790 (pfam10976), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)