myRT

myRT report for GCA_002883235.1_FW305-3-2-15-A-R2A1

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Seq: POFG01000022.1 Pseudomonas sp. FW305-3-2-15-A-R2A1 NODE_22_length_119399_cov_47.2536, whole genome shotgun sequence (119399 bp)
Overview 1 RT 1: 88930-92271 bp Neighborhood of RT #1 [88930, 92285] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88930-89397 bp Feature: gene Location: 89366-90805 bp Feature: domain Description: Resolvase Location: 89387-89825 bp Feature: domain Description: Resolvase Location: 89387-89825 bp Feature: domain Description: Recombinase Location: 89921-90278 bp Feature: domain Description: Recombinase Location: 89921 -90278 bp Feature: domain Description: Zn_ribbon_recom Location: 90317-90521 bp Feature: domain Description: Zn_ribbon_recom Location: 9031 7-90521 bp Feature: gene Location: 91143-91391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91146-91368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 46-91 368 bp Feature: gene Location: 91562-91771 bp Feature: gene Location: 91953-92285 bp Feature: domain Description: DUF2790 Location: 92043-92271 bp Feature: domain Description: DUF2790 Location: 92043-92271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POFG01000097.1 Pseudomonas sp. FW305-3-2-15-A-R2A1 NODE_97_length_1842_cov_72.915, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 2 -1337 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POFG01000009.1 Pseudomonas sp. FW305-3-2-15-A-R2A1 NODE_9_length_176446_cov_43.2876, whole genome shotgun sequence (176446 bp)
Overview 1 RT 1: 167829-171714 bp Neighborhood of RT #1 [167829, 171714] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 167829-167981 bp Feature: gene Location: 168022-169917 bp Feature: domain Description: Resolvase Location: 168043-168481 bp Feature: domain Description: Resolvase Location: 168043 -168481 bp Feature: domain Description: Recombinase Location: 168577-168934 bp Feature: domain Description: Recombinase Location: 168577-16893 4 bp Feature: domain Description: Zn_ribbon_recom Location: 168973-169177 bp Feature: domain Description: Zn_ribbon_recom Location: 168973 -169177 bp Feature: gene Location: 170168-171217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170240-170513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170240-170513 bp Feature: domain Description: GIIM Note: maturase Location: 170570-170798 bp Feature: domain Description: GIIM Note: maturase Location: 170570-170798 bp Feature: gene Location: 171397-171531 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 171403-171514 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 171403 -171514 bp Feature: gene Location: 171535-171714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)