myRT

myRT report for GCA_002883245.1_GW101-3F01

Download annotations/find similar RTs

Seq: POFJ01000014.1 Pseudomonas sp. GW101-3F01 NODE_14_length_167668_cov_33.3138, whole genome shotgun sequence (167668 bp)
Overview 1 RT 1: 4733-8618 bp Neighborhood of RT #1 [4733, 8618] DDE_Tnp_IS66_C RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 4733-4912 bp Feature: gene Location: 4916-5050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4922-5033 bp Feature: gene Location: 5230-6279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5302-5575 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: domain Description: GIIM Note: maturase Location: 5632-5860 bp Feature: gene Location: 6530-8425 bp Feature: domain Description: Resolvase Location: 6551-6989 bp Feature: domain Description: Resolvase Location: 6551 -6989 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Recombinase Location: 7085-7442 bp Feature: domain Description: Zn_ribbon_recom Location: 7481-7685 bp Feature: domain Description: Zn_ribbon_recom Location: 7481 -7685 bp Feature: gene Location: 8466-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: POFJ01000025.1 Pseudomonas sp. GW101-3F01 NODE_25_length_119410_cov_35.9495, whole genome shotgun sequence (119410 bp)
Overview 1 RT 1: 88941-92282 bp Neighborhood of RT #1 [88941, 92296] Resolvase Recombinase Zn_ribbon_recom RVT-GII DUF2790 Feature: gene Location: 88941-89408 bp Feature: gene Location: 89377-90816 bp Feature: domain Description: Resolvase Location: 89398-89836 bp Feature: domain Description: Resolvase Location: 89398-89836 bp Feature: domain Description: Recombinase Location: 89932-90289 bp Feature: domain Description: Recombinase Location: 89932 -902 89 bp Feature: domain Description: Zn_ribbon_recom Location: 90328-90532 bp Feature: domain Description: Zn_ribbon_recom Location: 9032 8-90532 bp Feature: gene Location: 91154-91402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91157-91379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91157-91379 bp Feature: gene Location: 91573-91782 bp Feature: gene Location: 91964-92296 bp Feature: domain Description: DUF2790 Location: 92054-92282 bp Feature: domain Description: DUF2 790 Location: 92 054-92 2 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, DUF2790 (pfam10976)

Seq: POFJ01000090.1 Pseudomonas sp. GW101-3F01 NODE_90_length_1842_cov_57.7065, whole genome shotgun sequence (1842 bp)
Overview 1 RT 1: 5-1595 bp Neighborhood of RT #1 [5, 1753] RVT-GII GIIM Feature: gene Location: 5-382 bp Feature: gene Location: 461-1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-1337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 722-13 3 7 bp Feature: domain Description: GIIM Note: maturase Location: 1391-1595 bp Feature: domain Description: GIIM Note: maturase Location: 13 91-1595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)