myRT

myRT report for GCA_002885775.1_ASM288577v1

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Seq: PNYH01000011.1 Escherichia coli strain B7S10 NODE_11_length_146337_cov_53.1437, whole genome shotgun sequence (146337 bp)
Overview 1 RT 1: 135319-140814 bp Neighborhood of RT #1 [135319, 140834] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 135319-136239 bp Feature: domain Description: AbiEii Location: 135361-136102 bp Feature: domain Description: AbiEii Location: 1 35361 -1 361 02 bp Feature: gene Location: 136226-137029 bp Feature: domain Description: AbiEi_3_N Location: 136259-136520 bp Feature: domain Description: AbiEi_3_N Location: 1 36259-1 36520 bp Feature: domain Description: AbiEi_3 Location: 136532-136988 bp Feature: domain Description: AbiEi_3 Location: 1 36532-1 36988 bp Feature: gene Location: 137324-138421 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 137852-138341 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 37852-1 38341 bp Feature: gene Location: 138467-140533 bp Feature: domain Description: nitrilase Location: 139847-140444 bp Feature: domain Description: nitrilase Location: 1 39847-1 40444 bp Feature: gene Location: 140694-140834 bp Feature: domain Description: Phage_ASH Location: 140721-140814 bp Feature: domain Description: Phage_ASH Location: 1 40721 -1 4081 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: PNYH01000055.1 Escherichia coli strain B7S10 NODE_55_length_27883_cov_56.9178, whole genome shotgun sequence (27883 bp)
Overview 1 RT 1: 3807-8653 bp Neighborhood of RT #1 [3807, 8653] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 3807-5240 bp Feature: domain Description: DUF3987 Location: 3900-4977 bp Feature: domain Description: DUF3987 Location: 3900-4977 bp Feature: gene Location: 6099-6662 bp Feature: domain Description: Inovirus_Gp2 Location: 6156-6597 bp Feature: domain Description: Inovirus_Gp2 Location: 6156-6597 bp Feature: gene Location: 6988-8151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7102-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7102 -7789 bp Feature: gene Location: 8138-8446 bp Feature: gene Location: 8480-8653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII

Seq: PNYH01000093.1 Escherichia coli strain B7S10 NODE_93_length_8398_cov_50.6696, whole genome shotgun sequence (8398 bp)
Overview 1 RT 1: 5193-8398 bp Neighborhood of RT #1 [5193, 8397] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5193-5492 bp Feature: domain Description: InsE Location: 5223-5484 bp Feature: domain Description: InsE Location: 5223 -5484 bp Feature: gene Location: 5489-5956 bp Feature: domain Description: PHA02517 Location: 5555-5894 bp Feature: domain Description: PHA02517 Location: 5555-5894 bp Feature: gene Location: 6548-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-7553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7628-7784 bp Feature: domain Description: GIIM Note: maturase Location: 7628-7784 bp Feature: gene Location: 7841-8071 bp Feature: gene Location: 8182-8397 bp Feature: domain Description: PHA02517 Location: 8185-8398 bp Feature: domain Description: PHA02517 Location: 8185-83 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)