myRT

myRT report for GCA_002885795.1_ASM288579v1

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Seq: PNYG01000007.1 Escherichia coli strain B7S3 NODE_7_length_175277_cov_49.8709, whole genome shotgun sequence (175277 bp)
Overview 1 RT 1: 135319-140814 bp 2 RT 2: 166625-171208 bp Neighborhood of RT #1 [135319, 140834] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Neighborhood of RT #2 [166625, 171471] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 135319-136239 bp Feature: domain Description: AbiEii Location: 135361-136102 bp Feature: domain Description: AbiEii Location: 1 35361 -1 361 02 bp Feature: gene Location: 136226-137029 bp Feature: domain Description: AbiEi_3_N Location: 136259-136520 bp Feature: domain Description: AbiEi_3_N Location: 1 36259-1 36520 bp Feature: domain Description: AbiEi_3 Location: 136532-136988 bp Feature: domain Description: AbiEi_3 Location: 1 36532-1 36988 bp Feature: gene Location: 137324-138421 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 137852-138341 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 37852-1 38341 bp Feature: gene Location: 138467-140533 bp Feature: domain Description: nitrilase Location: 139847-140444 bp Feature: domain Description: nitrilase Location: 1 39847-1 40444 bp Feature: gene Location: 140694-140834 bp Feature: domain Description: Phage_ASH Location: 140721-140814 bp Feature: domain Description: Phage_ASH Location: 1 40721 -1 4081 4 bp Feature: gene Location: 166625-166798 bp Feature: gene Location: 166832-167140 bp Feature: gene Location: 167127-168290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167241-167928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 67241 -1 67928 bp Feature: gene Location: 168616-169179 bp Feature: domain Description: Inovirus_Gp2 Location: 168673-169114 bp Feature: domain Description: Inovirus_Gp2 Location: 1 68673-1 691 1 4 bp Feature: gene Location: 170038-171471 bp Feature: domain Description: DUF3987 Location: 170131-171208 bp Feature: domain Description: DUF3987 Location: 1 701 31 -1 71 208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554), RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: PNYG01000090.1 Escherichia coli strain B7S3 NODE_90_length_8901_cov_54.7866, whole genome shotgun sequence (8901 bp)
Overview 1 RT 1: 5696-8901 bp Neighborhood of RT #1 [5696, 8900] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5696-5995 bp Feature: domain Description: InsE Location: 5726-5990 bp Feature: domain Description: InsE Location: 572 6-5990 bp Feature: gene Location: 5992-6459 bp Feature: domain Description: PHA02517 Location: 6058-6397 bp Feature: domain Description: PHA02 517 Location: 6058-6397 bp Feature: gene Location: 7051-8292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7324-8056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 732 4-8056 bp Feature: domain Description: GIIM Note: maturase Location: 8131-8287 bp Feature: domain Description: GIIM Note: maturase Location: 8131-82 87 bp Feature: gene Location: 8344-8574 bp Feature: gene Location: 8685-8900 bp Feature: domain Description: PHA02517 Location: 8688-8901 bp Feature: domain Description: PHA02 517 Location: 8688-8901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)