myRT

myRT report for GCA_002888495.2_ASM288849v2

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Seq: POSV02000117.1 Escherichia coli strain SP-46 Combo NODE_117_length_2272_cov_2950.9, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: POSV02000006.1 Escherichia coli strain SP-46 Combo NODE_6_length_148484_cov_181.754, whole genome shotgun sequence (148484 bp)
Overview 1 RT 1: 113915-117797 bp Neighborhood of RT #1 [113915, 117802] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 113915-114373 bp Feature: domain Description: dut Location: 113921-114368 bp Feature: domain Description: dut Location: 11392 1-114368 bp Feature: gene Location: 114480-115076 bp Feature: domain Description: slmA Location: 114486-115062 bp Feature: domain Description: slmA Location: 114486-115062 bp Feature: gene Location: 115122-116081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115257-115806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1152 57-115806 bp Feature: gene Location: 116379-117035 bp Feature: domain Description: pyrE Location: 116397-117030 bp Feature: domain Description: pyrE Location: 116397-117030 bp Feature: gene Location: 117086-117802 bp Feature: domain Description: rph Location: 117089-117797 bp Feature: domain Description: rph Location: 117089-117797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)