myRT

myRT report for GCA_002888525.1_ASM288852v1

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Seq: POSZ01000017.1 Escherichia coli strain 700414 NODE_17_length_101886_cov_177.827, whole genome shotgun sequence (101886 bp)
Overview 1 RT 1: 50-2883 bp Neighborhood of RT #1 [50, 2883] RVT-AbiP2 HTH_29 HTH_33 DDE_3 Feature: gene Location: 50-1420 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 311-767 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 31 1 -767 bp Feature: gene Location: 1522-2559 bp Feature: domain Description: HTH_29 Location: 1618-1789 bp Feature: domain Description: HTH_29 Location: 1 61 8-1 789 bp Feature: domain Description: HTH_33 Location: 1822-1984 bp Feature: domain Description: HTH_33 Location: 1 822-1 984 bp Feature: domain Description: DDE_3 Location: 2026-2455 bp Feature: domain Description: DDE_3 Location: 2026-2455 bp Feature: gene Location: 2593-2883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: POSZ01000078.1 Escherichia coli strain 700414 NODE_78_length_2276_cov_461.19, whole genome shotgun sequence (2276 bp)
Overview 1 RT 1: 3-1940 bp Neighborhood of RT #1 [3, 2185] RVT-GII GIIM Feature: gene Location: 3-368 bp Feature: gene Location: 662-2185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 935-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 935-1667 bp Feature: domain Description: GIIM Note: maturase Location: 1742-1940 bp Feature: domain Description: GIIM Note: maturase Location: 1742 -1940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)