myRT

myRT report for GCA_002890635.1_ASM289063v1

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Seq: MIQD01000015.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1015, whole genome shotgun sequence (41869 bp)
Overview 1 RT 1: 19623-25195 bp Neighborhood of RT #1 [19623, 27417] GpsA lysS RVT-Retrons OMP_RagA_SusC Feature: gene Location: 19623-20633 bp Feature: domain Description: GpsA Location: 19656-20622 bp Feature: domain Description: GpsA Location: 1 9656-20622 bp Feature: gene Location: 20652-22391 bp Feature: domain Description: lysS Location: 20670-22164 bp Feature: domain Description: lysS Location: 20670-221 64 bp Feature: gene Location: 22464-23555 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22761-23307 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22761 -23307 bp Feature: gene Location: 24046-24309 bp Feature: gene Location: 24865-27417 bp Feature: domain Description: OMP_RagA_SusC Location: 24946-25195 bp Feature: domain Description: OMP_RagA_SusC Location: 24946-251 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GpsA (COG0240), lysS (PRK02983), RVT-Retrons, OMP_RagA_SusC (TIGR04056)

Seq: MIQD01000128.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1131, whole genome shotgun sequence (3709 bp)
Overview 1 RT 1: 771-3708 bp Neighborhood of RT #1 [771, 3708] RVT_N RVT-GII GIIM Feature: gene Location: 771-1115 bp Feature: gene Location: 1384-1557 bp Feature: gene Location: 1749-3434 bp Feature: RT Description: RVT_N Location: 1806-2049 bp Feature: RT Description: RVT_N Location: 1806-2 049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2094-2742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 094-2 742 bp Feature: domain Description: GIIM Note: maturase Location: 2796-3027 bp Feature: domain Description: GIIM Note: maturase Location: 2 796-302 7 bp Feature: gene Location: 3409-3708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MIQD01000205.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1214, whole genome shotgun sequence (1379 bp)
Overview 1 RT 1: 645-1347 bp Neighborhood of RT #1 [645, 1376] RVT-GII Feature: gene Location: 645-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912-13 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MIQD01000266.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1285, whole genome shotgun sequence (851 bp)
Overview 1 RT 1: 2-513 bp Neighborhood of RT #1 [2, 513] RVT-GII Feature: gene Location: 2-286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203-287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203-287 bp Feature: gene Location: 322-513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MIQD01000275.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1296, whole genome shotgun sequence (794 bp)
Overview 1 RT 1: 1-778 bp Neighborhood of RT #1 [1, 792] RVT-GII GIIM Feature: gene Location: 1-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-5 86 bp Feature: domain Description: GIIM Note: maturase Location: 649-778 bp Feature: domain Description: GIIM Note: maturase Location: 649-778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MIQD01000285.1 Tannerella sp. oral taxon 808 isolate cell110 Ga0078791_1307, whole genome shotgun sequence (741 bp)
Overview 1 RT 1: 3-678 bp Neighborhood of RT #1 [3, 740] RVT-GII Intron_maturas2 Feature: gene Location: 3-740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-300 bp Feature: domain Description: Intron_maturas2 Location: 444-678 bp Feature: domain Description: Intron_maturas2 Location: 444-6 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)