myRT

myRT report for GCA_002892785.1_ASM289278v1

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Seq: POSH01000008.1 Vibrio diazotrophicus strain 60.6B Contig008, whole genome shotgun sequence (206116 bp)
Overview 1 RT 1: 81116-85791 bp Neighborhood of RT #1 [81116, 85823] PRK11431 COG3547 RVT_N RVT-GII GIIM COG3547 Feature: gene Location: 81116-81433 bp Feature: domain Description: PRK11431 Location: 81119-81428 bp Feature: domain Description: PRK1 1 431 Location: 81 1 1 9-81 428 bp Feature: gene Location: 81708-82742 bp Feature: domain Description: COG3547 Location: 81726-82692 bp Feature: domain Description: COG3547 Location: 81 726-82692 bp Feature: gene Location: 83238-84437 bp Feature: RT Description: RVT_N Location: 83241-83433 bp Feature: RT Description: RVT_N Location: 83241 -83433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83478-84105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83478-841 05 bp Feature: domain Description: GIIM Note: maturase Location: 84165-84372 bp Feature: domain Description: GIIM Note: maturase Location: 841 65-84372 bp Feature: gene Location: 84561-84791 bp Feature: gene Location: 84822-85823 bp Feature: domain Description: COG3547 Location: 84843-85791 bp Feature: domain Description: COG3547 Location: 84843-85791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11431 (quaternary ammonium compound efflux SMR transporter SugE), COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: POSH01000027.1 Vibrio diazotrophicus strain 60.6B Contig027, whole genome shotgun sequence (29348 bp)
Overview 1 RT 1: 9644-14090 bp Neighborhood of RT #1 [9644, 14098] Phage_cap_P2 Ogr_Delta RVT-Retrons P Feature: gene Location: 9644-10672 bp Feature: domain Description: Phage_cap_P2 Location: 9668-10631 bp Feature: domain Description: Phage_cap_P2 Location: 9668-10631 bp Feature: gene Location: 10684-10947 bp Feature: domain Description: Ogr_Delta Location: 10702-10807 bp Feature: domain Description: Ogr_Delta Location: 10702 -10807 bp Feature: gene Location: 11502-13349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11637-12333 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11637-12 333 bp Feature: gene Location: 13364-13621 bp Feature: gene Location: 13745-14098 bp Feature: domain Description: P Location: 13769-14090 bp Feature: domain Description: P Location: 13769-14090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), RVT-Retrons, P (PHA02535), Phage_cap_P2 (pfam05125)

Seq: POSH01000031.1 Vibrio diazotrophicus strain 60.6B Contig031, whole genome shotgun sequence (19155 bp)
Overview 1 RT 1: 14279-18255 bp Neighborhood of RT #1 [14279, 18255] RVT-Retrons TIR_2 Feature: gene Location: 14279-14764 bp Feature: gene Location: 14957-15382 bp Feature: gene Location: 15716-17311 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15968-16580 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15968-16580 bp Feature: domain Description: TIR_2 Location: 16916-17300 bp Feature: domain Description: TIR_2 Location: 16916-173 00 bp Feature: gene Location: 17423-17869 bp Feature: gene Location: 17995-18255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676)