myRT

myRT report for GCA_002893125.1_ASM289312v1

Download annotations/find similar RTs

Seq: NJHS01000026.1 Cylindrospermopsis raciborskii C07 NODE_30, whole genome shotgun sequence (36504 bp)
Overview 1 RT 1: 4342-9717 bp Neighborhood of RT #1 [4342, 9725] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR DppC Feature: gene Location: 4342-4866 bp Feature: domain Description: N_methyl Location: 4402-4471 bp Feature: domain Description: N_methyl Location: 4402-4471 bp Feature: domain Description: Pilin_GH Location: 4507-4834 bp Feature: domain Description: Pilin_GH Location: 4507-4834 bp Feature: gene Location: 5081-5269 bp Feature: domain Description: KOG0404 Location: 5111-5258 bp Feature: domain Description: KOG0404 Location: 51 1 1 -5258 bp Feature: gene Location: 5923-7488 bp Feature: RT Description: RVT_N Location: 6007-6220 bp Feature: RT Description: RVT_N Location: 6007-6220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6265-6886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6265-6886 bp Feature: domain Description: GIIM Note: maturase Location: 7009-7231 bp Feature: domain Description: GIIM Note: maturase Location: 7009-7231 bp Feature: gene Location: 7554-8708 bp Feature: domain Description: KOG0404 Location: 7557-8289 bp Feature: domain Description: KOG0404 Location: 7557-8289 bp Feature: domain Description: TRX_NTR Location: 8409-8694 bp Feature: domain Description: TRX_NTR Location: 8409-8694 bp Feature: gene Location: 8844-9725 bp Feature: domain Description: DppC Location: 8889-9717 bp Feature: domain Description: DppC Location: 8889-971 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_NTR (cd02949), DppC (COG1173)

Seq: NJHS01000004.1 Cylindrospermopsis raciborskii C07 NODE_4, whole genome shotgun sequence (193807 bp)
Overview 1 RT 1: 49661-54780 bp Neighborhood of RT #1 [49661, 54794] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 49661-49924 bp Feature: domain Description: RNR_II_monomer Location: 49724-49919 bp Feature: domain Description: RNR_II_monomer Location: 4972 4-49919 bp Feature: gene Location: 50354-50506 bp Feature: gene Location: 50533-51771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50710-51307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50710-51307 bp Feature: domain Description: GIIM Note: maturase Location: 51394-51628 bp Feature: domain Description: GIIM Note: maturase Location: 51394-5162 8 bp Feature: gene Location: 51952-53910 bp Feature: domain Description: RTPR Location: 51955-53884 bp Feature: domain Description: RTPR Location: 51955-53884 bp Feature: gene Location: 53940-54794 bp Feature: domain Description: DUF3598 Location: 53949-54780 bp Feature: domain Description: DUF3598 Location: 53949-54780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNR_II_monomer (cd01676), RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: NJHS01000047.1 Cylindrospermopsis raciborskii C07 NODE_55, whole genome shotgun sequence (86020 bp)
Overview 1 RT 1: 74054-79027 bp Neighborhood of RT #1 [74054, 79197] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 74054-75133 bp Feature: domain Description: MviM Location: 74120-75071 bp Feature: domain Description: MviM Location: 74120-75071 bp Feature: gene Location: 75330-75998 bp Feature: domain Description: QueC Location: 75333-75990 bp Feature: domain Description: QueC Location: 753 3 3 -75990 bp Feature: gene Location: 76131-77831 bp Feature: RT Description: RVT_N Location: 76158-76368 bp Feature: RT Description: RVT_N Location: 76158-763 68 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76422-77103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76422-77103 bp Feature: domain Description: GIIM Note: maturase Location: 77202-77436 bp Feature: domain Description: GIIM Note: maturase Location: 77202-7743 6 bp Feature: gene Location: 77978-78178 bp Feature: gene Location: 78493-79197 bp Feature: domain Description: DUF3157 Location: 78874-79027 bp Feature: domain Description: DUF3 157 Location: 78874-79027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHS01000417.1 Cylindrospermopsis raciborskii C07 NODE_877, whole genome shotgun sequence (90621 bp)
Overview 1 RT 1: 47022-50524 bp Neighborhood of RT #1 [47022, 50541] cyt_b559_alpha CpeS RVT_N RVT-GII RVT-GII GIIM CpeS HEAT Feature: gene Location: 47022-47270 bp Feature: domain Description: cyt_b559_alpha Location: 47028-47259 bp Feature: domain Description: cyt_b559_alpha Location: 4 7028-4 7259 bp Feature: gene Location: 47424-47687 bp Feature: domain Description: CpeS Location: 47427-47634 bp Feature: domain Description: CpeS Location: 4 74 27-4 7634 bp Feature: gene Location: 47841-48941 bp Feature: RT Description: RVT_N Location: 47877-48048 bp Feature: RT Description: RVT_N Location: 4 7877-4 804 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48069-48423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 8069-4 84 23 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48423-48588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 84 23-4 8588 bp Feature: domain Description: GIIM Note: maturase Location: 48648-48840 bp Feature: domain Description: GIIM Note: maturase Location: 4 864 8-4 884 0 bp Feature: gene Location: 49465-49731 bp Feature: domain Description: CpeS Location: 49471-49699 bp Feature: domain Description: CpeS Location: 4 94 71-4 9699 bp Feature: gene Location: 49870-50541 bp Feature: domain Description: HEAT Location: 49879-50524 bp Feature: domain Description: HEAT Location: 4 9879-50524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044)