myRT

myRT report for GCA_002893145.1_ASM289314v1

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Seq: NJHT01000015.1 Cylindrospermopsis raciborskii C04 NODE_15, whole genome shotgun sequence (86035 bp)
Overview 1 RT 1: 74060-79033 bp Neighborhood of RT #1 [74060, 79203] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 74060-75139 bp Feature: domain Description: MviM Location: 74126-75077 bp Feature: domain Description: MviM Location: 741 26-75077 bp Feature: gene Location: 75336-76004 bp Feature: domain Description: QueC Location: 75339-75996 bp Feature: domain Description: QueC Location: 75339-75996 bp Feature: gene Location: 76137-77837 bp Feature: RT Description: RVT_N Location: 76164-76374 bp Feature: RT Description: RVT_N Location: 761 64-76374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76428-77109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76428-771 09 bp Feature: domain Description: GIIM Note: maturase Location: 77208-77442 bp Feature: domain Description: GIIM Note: maturase Location: 77208-77442 bp Feature: gene Location: 77984-78184 bp Feature: gene Location: 78499-79203 bp Feature: domain Description: DUF3157 Location: 78880-79033 bp Feature: domain Description: DUF31 57 Location: 78880-79033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHT01000032.1 Cylindrospermopsis raciborskii C04 NODE_37, whole genome shotgun sequence (36646 bp)
Overview 1 RT 1: 4348-9723 bp Neighborhood of RT #1 [4348, 9731] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR DppC Feature: gene Location: 4348-4872 bp Feature: domain Description: N_methyl Location: 4408-4477 bp Feature: domain Description: N_methyl Location: 4408-4477 bp Feature: domain Description: Pilin_GH Location: 4513-4840 bp Feature: domain Description: Pilin_GH Location: 4513-4840 bp Feature: gene Location: 5087-5275 bp Feature: domain Description: KOG0404 Location: 5117-5264 bp Feature: domain Description: KOG0404 Location: 5117-52 64 bp Feature: gene Location: 5929-7494 bp Feature: RT Description: RVT_N Location: 6013-6226 bp Feature: RT Description: RVT_N Location: 6013-62 2 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6271-6892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 71-6892 bp Feature: domain Description: GIIM Note: maturase Location: 7015-7237 bp Feature: domain Description: GIIM Note: maturase Location: 7015-72 37 bp Feature: gene Location: 7560-8714 bp Feature: domain Description: KOG0404 Location: 7563-8295 bp Feature: domain Description: KOG0404 Location: 7563-82 95 bp Feature: domain Description: TRX_NTR Location: 8415-8700 bp Feature: domain Description: TRX_NTR Location: 8415-8700 bp Feature: gene Location: 8850-9731 bp Feature: domain Description: DppC Location: 8895-9723 bp Feature: domain Description: DppC Location: 8895-972 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_NTR (cd02949), DppC (COG1173)

Seq: NJHT01000035.1 Cylindrospermopsis raciborskii C04 NODE_40, whole genome shotgun sequence (67092 bp)
Overview 1 RT 1: 23487-26989 bp Neighborhood of RT #1 [23487, 27006] cyt_b559_alpha CpeS RVT_N RVT-GII RVT-GII GIIM CpeS HEAT Feature: gene Location: 23487-23735 bp Feature: domain Description: cyt_b559_alpha Location: 23493-23724 bp Feature: domain Description: cyt_b559_alpha Location: 23 493 -23 724 bp Feature: gene Location: 23889-24152 bp Feature: domain Description: CpeS Location: 23892-24099 bp Feature: domain Description: CpeS Location: 23 892-24099 bp Feature: gene Location: 24306-25406 bp Feature: RT Description: RVT_N Location: 24342-24513 bp Feature: RT Description: RVT_N Location: 243 42-24513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24534-24888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2453 4-24888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24888-25053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24888-25053 bp Feature: domain Description: GIIM Note: maturase Location: 25113-25305 bp Feature: domain Description: GIIM Note: maturase Location: 25113 -253 05 bp Feature: gene Location: 25930-26196 bp Feature: domain Description: CpeS Location: 25936-26164 bp Feature: domain Description: CpeS Location: 2593 6-26164 bp Feature: gene Location: 26335-27006 bp Feature: domain Description: HEAT Location: 26344-26989 bp Feature: domain Description: HEAT Location: 263 44-26989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044)

Seq: NJHT01000006.1 Cylindrospermopsis raciborskii C04 NODE_6, whole genome shotgun sequence (193784 bp)
Overview 1 RT 1: 139020-144148 bp Neighborhood of RT #1 [139020, 144153] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Feature: gene Location: 139020-139874 bp Feature: domain Description: DUF3598 Location: 139029-139860 bp Feature: domain Description: DUF3598 Location: 139029-139860 bp Feature: gene Location: 139904-141859 bp Feature: domain Description: RTPR Location: 139907-141833 bp Feature: domain Description: RTPR Location: 139907-14 1833 bp Feature: gene Location: 142043-143281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142220-142817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 2220-14 2817 bp Feature: domain Description: GIIM Note: maturase Location: 142904-143138 bp Feature: domain Description: GIIM Note: maturase Location: 14 2904 -14 3138 bp Feature: gene Location: 143308-143460 bp Feature: gene Location: 143890-144153 bp Feature: domain Description: RNR_II_monomer Location: 143953-144148 bp Feature: domain Description: RNR_II_monomer Location: 14 3953-14 4 14 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676)