myRT

myRT report for GCA_002893185.1_ASM289318v1

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Seq: NJHV01000009.1 Cylindrospermopsis raciborskii S14 NODE_13, whole genome shotgun sequence (32589 bp)
Overview 1 RT 1: 261-5380 bp Neighborhood of RT #1 [261, 5394] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 261-524 bp Feature: domain Description: RNR_II_monomer Location: 324-519 bp Feature: domain Description: RNR_II_monomer Location: 324-51 9 bp Feature: gene Location: 954-1106 bp Feature: gene Location: 1133-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1310-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 0-1 907 bp Feature: domain Description: GIIM Note: maturase Location: 1994-2228 bp Feature: domain Description: GIIM Note: maturase Location: 1 994-2228 bp Feature: gene Location: 2552-4510 bp Feature: domain Description: RTPR Location: 2555-4484 bp Feature: domain Description: RTPR Location: 2555-4484 bp Feature: gene Location: 4540-5394 bp Feature: domain Description: DUF3598 Location: 4549-5380 bp Feature: domain Description: DUF3598 Location: 4549-5380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), RNR_II_monomer (cd01676)

Seq: NJHV01000021.1 Cylindrospermopsis raciborskii S14 NODE_27, whole genome shotgun sequence (36799 bp)
Overview 1 RT 1: 4308-8994 bp Neighborhood of RT #1 [4308, 8999] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR TRX_NTR Feature: gene Location: 4308-4832 bp Feature: domain Description: N_methyl Location: 4368-4437 bp Feature: domain Description: N_methyl Location: 4368-4437 bp Feature: domain Description: Pilin_GH Location: 4473-4800 bp Feature: domain Description: Pilin_GH Location: 4473-4800 bp Feature: gene Location: 5047-5235 bp Feature: domain Description: KOG0404 Location: 5077-5224 bp Feature: domain Description: KOG0404 Location: 5077-52 2 4 bp Feature: gene Location: 5889-7454 bp Feature: RT Description: RVT_N Location: 5973-6186 bp Feature: RT Description: RVT_N Location: 5973-6186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6231-6852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 31-6852 bp Feature: domain Description: GIIM Note: maturase Location: 6975-7197 bp Feature: domain Description: GIIM Note: maturase Location: 6975-7197 bp Feature: gene Location: 7520-8674 bp Feature: domain Description: KOG0404 Location: 7523-8255 bp Feature: domain Description: KOG0404 Location: 752 3-82 55 bp Feature: domain Description: TRX_NTR Location: 8375-8660 bp Feature: domain Description: TRX_NTR Location: 8375-8660 bp Feature: gene Location: 8775-8999 bp Feature: domain Description: TRX_NTR Location: 8778-8994 bp Feature: domain Description: TRX_NTR Location: 8778-8994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N_methyl (pfam07963), Pilin_GH (pfam16734), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_NTR (cd02949)

Seq: NJHV01000003.1 Cylindrospermopsis raciborskii S14 NODE_3, whole genome shotgun sequence (40250 bp)
Overview 1 RT 1: 14062-19035 bp Neighborhood of RT #1 [14062, 19205] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 14062-15141 bp Feature: domain Description: MviM Location: 14128-15079 bp Feature: domain Description: MviM Location: 14128-15079 bp Feature: gene Location: 15338-16006 bp Feature: domain Description: QueC Location: 15341-15998 bp Feature: domain Description: QueC Location: 153 41-15998 bp Feature: gene Location: 16139-17839 bp Feature: RT Description: RVT_N Location: 16166-16376 bp Feature: RT Description: RVT_N Location: 16166-163 76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16430-17111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1643 0-17111 bp Feature: domain Description: GIIM Note: maturase Location: 17210-17444 bp Feature: domain Description: GIIM Note: maturase Location: 17210-17444 bp Feature: gene Location: 17986-18186 bp Feature: gene Location: 18501-19205 bp Feature: domain Description: DUF3157 Location: 18882-19035 bp Feature: domain Description: DUF3 157 Location: 18882-1903 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHV01000045.1 Cylindrospermopsis raciborskii S14 NODE_76, whole genome shotgun sequence (13556 bp)
Overview 1 RT 1: 5306-8814 bp Neighborhood of RT #1 [5306, 8825] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 5306-5977 bp Feature: domain Description: HEAT Location: 5315-5960 bp Feature: domain Description: HEAT Location: 5315-5960 bp Feature: gene Location: 6116-6382 bp Feature: domain Description: CpeS Location: 6122-6350 bp Feature: domain Description: CpeS Location: 6122-6350 bp Feature: gene Location: 6906-8006 bp Feature: RT Description: RVT_N Location: 6942-7113 bp Feature: RT Description: RVT_N Location: 694 2-7113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7134-7488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7134 -74 88 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7488-7653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 88-7653 bp Feature: domain Description: GIIM Note: maturase Location: 7713-7905 bp Feature: domain Description: GIIM Note: maturase Location: 7713-7905 bp Feature: gene Location: 8160-8423 bp Feature: domain Description: CpeS Location: 8163-8370 bp Feature: domain Description: CpeS Location: 8163-8370 bp Feature: gene Location: 8577-8825 bp Feature: domain Description: cyt_b559_alpha Location: 8583-8814 bp Feature: domain Description: cyt_b559_alpha Location: 8583-8814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)